Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADK4
Confidence3.64%DateThu Jan 5 11:21:13 GMT 2012
Rank79Aligned Residues16
% Identity44%Templatec3p7kA_
PDB info PDB header:viral proteinChain: A: PDB Molecule:gp41 peptide; PDBTitle: gp41 peptide
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   84.....90.........
Predicted Secondary structure 
Query SS confidence 















Query Sequence  VMQLQQRIAGLEKQLA
Query Conservation    

  

  

    
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Template Conservation 






  


 

 
Template Sequence  IKQLQARILAVEKKIE
Template Known Secondary structure  T
Template Predicted Secondary structure 
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   30.........40.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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