Job Description P0ADK4 Confidence 4.65% Date Thu Jan 5 11:21:13 GMT 2012 Rank 62 Aligned Residues 62 % Identity 10% Template c3eamB_ PDB info PDB header:membrane protein, transport protein Chain: B: PDB Molecule:glr4197 protein; PDBTitle: an open-pore structure of a bacterial pentameric ligand-2 gated ion channel Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	D	Y	F	A	L	G	V	L	I	F	V	F	L	V	I	F	Y	G	I	I	I	L	H	D	I	P	Y	L	I	A	K	K	R	N	H	P	H	A	D	A	I	H	V	A	G	W	V	S	L	F	T	L	H	V	I	W	P	F	L	W	I	W	A	T	L
Query Conservation
Alig confidence																											.	.	.	.	.
Template Conservation																											.	.	.	.	.
Template Sequence		Y	T	G	A	I	I	F	M	I	Y	L	F	Y	F	V	A	V	I	E	V	T	V	Q	H	Y	.	.	.	.	.	L	K	V	E	S	Q	P	A	R	A	A	S	I	T	R	A	S	R	I	A	F	P	V	V	F	L	L	A	N	I	I	L	A	F	L	F	F
Template Known Secondary structure																											.	.	.	.	.				T	T
Template Predicted Secondary structure																											.	.	.	.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.						.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions