Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADK4
Confidence3.90%DateThu Jan 5 11:21:13 GMT 2012
Rank73Aligned Residues17
% Identity41%Templatec1qceB_
PDB info PDB header:viral proteinChain: B: PDB Molecule:protein (gp41); PDBTitle: solution nmr structure of ectodomain of siv gp41,2 restrained regularized mean structure plus 29 simulated3 annealing structures
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   84.....90.........100
Predicted Secondary structure 
Query SS confidence 
















Query Sequence  VMQLQQRIAGLEKQLAD
Query Conservation    

  

  

     
Alig confidence 
















Template Conservation 

 




 


 



Template Sequence  TKNLQTRVTAIEKYLKD
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
















   35....40.........50.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions