Job Description P60932 Confidence 3.95% Date Thu Jan 5 12:07:15 GMT 2012 Rank 86 Aligned Residues 130 % Identity 16% Template c3k3gA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:urea transporter; PDBTitle: crystal structure of the urea transporter from desulfovibrio vulgaris2 bound to 1,3-dimethylurea Resolution 2.40 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70													.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	H	M	I	I	V	G	H	L	L	G	F	E	G	D	T	A	K	T	F	E	V	V	I	Q	L	G	S	I	L	A	V	V	V	M	F	W	R	R	L	F	G	.	.	.	.	.	.	.	.	.	.	.	.	L	I	G	I	H	F	G	R	P	L	Q	H	E	G	E	S	K	G	R	L	T	L	I	H	I
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.																															.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.
Template Conservation														.																																																	.	.	.	.	.	.	.	.
Template Sequence		T	G	L	L	F	F	A	G	I	F	Y	N	.	S	T	T	L	G	V	C	A	V	L	G	T	A	A	S	T	L	T	A	Q	L	L	G	V	D	K	P	L	V	R	A	G	L	F	G	F	N	G	T	L	A	G	I	A	L	P	F	F	.	.	.	.	.	.	.	.	F	N	Y	E	P	A	M	L	G	Y	V
Template Known Secondary structure														.																							T								T	T	T	T	T														.	.	.	.	.	.	.	.	B				T	T
Template Predicted Secondary structure														.																																																	.	.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.									.	.	.	.	.	.	.	100	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.												.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	G	M	I	P	A	V	V	L	G	L	L	F	H	D	T	I	K	S	L	F	N	P	I	N	V	M	Y	A	L	V	V	G	G	L	L	L	I	A	A	E	C	L	K	P	K	E	P	.	.	.	.	.	.	.	.	.	.	.	R	A	P	G	L	D	D	M	T	Y	R	Q	A	F	M	I	G	C	F	Q
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	N	G	A	F	T	T	I	I	M	A	S	L	L	N	F	L	G	K	W	G	V	P	A	L	T	A	P	F	V	L	A	T	W	L	L	M	F	G	V	Y	K	L	S	L	F	H	P	G	A	L	I	A	P	A	L	P	S	V	D	M	G	T	V	T	G	R	T	F	M	E	G	L	F	K	G	V	G	E
Template Known Secondary structure																				G	G	G	T				T	T												G	G	G	G	T		T	T	S		B		T	T																												G
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		165	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	M
Template Known Secondary structure		G	G
Template Predicted Secondary structure
Template SS confidence
		188	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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