Job Description Q46909 Confidence 5.41% Date Thu Jan 5 12:35:47 GMT 2012 Rank 69 Aligned Residues 73 % Identity 11% Template c2wwbA_ PDB info PDB header:ribosome Chain: A: PDB Molecule:protein transport protein sec61 subunit alpha isoform 1; PDBTitle: cryo-em structure of the mammalian sec61 complex bound to the2 actively translating wheat germ 80s ribosome Resolution 6.48 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	T	S	P	V	R	M	D	D	L	P	L	N	R	F	H	C	R	I	A	A	L	T	F	G	A	H	L	T	D	G	Y	V	L	G	V	I	G	Y	A	I	I	Q	L	T	P	A	M	Q	L	T	P	F	M	A	G	M	I	G	G	S	A	L	L	G	L	F	L	G	S	L	V	L	G	W	I	S	D	H
Query Conservation
Alig confidence								.	.																																	.	.	.	.	.	.	.
Template Conservation								.	.																																	.	.	.	.	.	.	.
Template Sequence		V	G	D	T	P	K	.	.	D	R	A	L	F	N	G	A	Q	K	L	F	G	M	I	I	T	I	G	Q	S	I	V	Y	V	M	T	G	M	Y	G	D	.	.	.	.	.	.	.	P	S	E	M	G	A	G	I	C	L	L	I	T	I	Q	L	F	V	A	G	L	I	V	L	L	L	D	E	L	L	Q	K	G
Template Known Secondary structure				S	S	S	S	.	.		S	S																									T	S	S			.	.	.	.	.	.	.	S	S		S																												T	T
Template Predicted Secondary structure								.	.																																	.	.	.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.								140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		81	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	G
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		173	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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