 |
Job Description | Q46909 | Confidence | 12.94% | Date | Thu Jan 5 12:35:47 GMT 2012 |
Rank | 21 | Aligned Residues | 20 |
% Identity | 15% | Template | c2p1nD_ |
PDB info |
PDB header:signaling protein | Chain: D: PDB Molecule:skp1-like protein 1a; |
PDBTitle: mechanism of auxin perception by the tir1 ubiqutin ligase
|
Resolution | 2.50 Å |
|
  |   |
425 | . | . | . | . | 430 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | 440 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . |
|
|  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
Query Sequence |   |
K | A | L | P | L | V | A | A | G | N | V | G | G | . |
. |
. |
. |
. |
. |
. |
A | N | E | H | S | V | S |
Query Conservation |   |
|
|   |   |
|
|
|
|   |   |   |
|   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|
|
|
|   |   |
|
|
|   |   |
|   |
|   |
|
|
|   |   |   |   |
Template Sequence |   |
K | G | K | T | P | E | E | I | R | T | T | F | N | I | K | N | D | F | T | P | E | E | E | E | E | V | R |
Template Known Secondary structure |   |
T | T |
|
|  |  |  |  |  |  |  | S |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
126 | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|