Return to main results Retrieve Phyre Job Id

Job DescriptionQ46909
Confidence17.96%DateThu Jan 5 12:35:47 GMT 2012
Rank13Aligned Residues60
% Identity10%Templatec2jlnA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:mhp1; PDBTitle: structure of mhp1, a nucleobase-cation-symport-1 family2 transporter
Resolution2.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   383......390.........400.........410.........420.........430.........440...
Predicted Secondary structure 












Query SS confidence 




























































Query Sequence  AAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSV
Query Conservation    
     
 
    
             
  
      




  



   
       
Alig confidence 













































.













Template Conservation                           
     
        
     .              
Template Sequence  VALAVYAVALAVSFLTPDLMFVTGLIAALLLHIPAMRWVAKTFPLF. SEAESRNEDYLRPI
Template Known Secondary structure  T
GGGTTTS
S
.
GGGGGS

Template Predicted Secondary structure 






.













Template SS confidence 




























































   410.........420.........430.........440.........450..... ....460.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions