Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8X2
Confidence1.49%DateThu Jan 5 11:08:55 GMT 2012
Rank86Aligned Residues45
% Identity18%Templatec3cm8A_
PDB info PDB header:rna binding protein/transferaseChain: A: PDB Molecule:polymerase acidic protein; PDBTitle: a rna polymerase subunit structure from virus
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   98.100.........110... ... ...120.. .... ...130.........140..
Predicted Secondary structure 




...

..

......

Query SS confidence 















. . .


. .





. .



. . . .















Query Sequence  NTAKYPQATFTSTSVK. . . KDG. . DELDIT. . GDLT. . . . LNGVTKPVTLEAKLIG
Query Conservation 
    
 
 
 
  
 ...   ..    
 ..
 

....
 



 
        
Alig confidence 















...


..





..



....















Template Conservation 


    

 


  




  

 







    
       
   

 
 
 
Template Sequence  DTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLLRTAIGQVSRPMFLYVRTNG
Template Known Secondary structure  SS



TTSSGGGGTT


TTS
Template Predicted Secondary structure 























Template SS confidence 























































   514.....520.........530.........540.........550.........560.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions