Job Description P75948 Confidence 99.89% Date Thu Jan 5 12:16:18 GMT 2012 Rank 24 Aligned Residues 212 % Identity 17% Template c3r78B_ PDB info PDB header:transferase Chain: B: PDB Molecule:aminoglycoside 3'-phosphotransferase apha1-iab; PDBTitle: crystal structure of the aminoglycoside phosphotransferase aph(3')-ia,2 atp-bound Resolution 2.40 Å

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		24	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.					.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure													.											.	.																												.												.	.	.	.
Query SS confidence													.											.	.																												.												.	.	.	.
Query Sequence		P	V	T	T	F	N	S	G	L	S	G	.	G	S	F	L	I	E	H	Q	G	Q	.	.	R	F	V	V	R	Q	P	H	D	P	D	A	P	Q	S	A	F	L	R	Q	Y	R	A	L	S	Q	L	.	P	A	C	I	A	P	K	P	H	L	Y	.	.	.	.	L	R	D	W	M	V	V	D	Y	L	P	G	A
Query Conservation													.											.	.																												.												.	.	.	.
Alig confidence													.											.	.							.	.																				.												.	.	.	.
Template Conservation																																.	.
Template Sequence		R	W	A	R	D	N	V	G	Q	S	G	A	T	I	Y	R	L	Y	G	K	P	N	A	P	E	L	F	L	K	H	.	.	G	K	G	S	V	A	N	D	V	T	D	E	X	V	R	L	N	W	L	T	A	F	X	P	L	P	T	I	K	H	F	I	R	T	P	D	D	A	W	L	L	T	T	A	I	P	G	K
Template Known Secondary structure								S			S	S										T	T	S								.	.			T																	T	T	T	S												S	S											S
Template Predicted Secondary structure																																.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		96	.										.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.												.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	K	.	.	.	.	.	.	.	.	.	T	Y	L	P	D	T	N	E	L	A	G	L	L	Y	Y	L	H	Q	Q	P	R	F	G	W	R	I	T	L	L	P	L	L	E	L	Y	W	Q	Q	S	D	P	A	R	R	T	.	.	.	.	.	.	.	.	.	.	.	V	G	W	L	R	M	L	K	R	L	R	K	A
Query Conservation				.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	A	F	Q	V	L	E	E	Y	P	D	S	G	E	N	I	V	D	A	L	A	V	F	L	R	R	L	H	S	I	P	V	C	N	C	P	F	N	S	D	R	V	F	R	L	A	Q	A	Q	S	R	X	N	N	G	L	V	D	A	S	D	F	D	D	E	R	N	G	W	P	V	E	Q	V	W	K	E	X	H	K
Template Known Secondary structure											G	G	G																		S		G	G	G				B																T	T				G	G	G			G	G	G	T	T												T
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		R	E	P	R	P	L	R	L	S	P	L	H	M	D	V	H	A	G	N	L	V	H	S	A	S	G	.	L	K	L	I	D	W	E	Y	A	G	D	G	D	I	A	L	E	L	A	A	V	W	V	E	N	T	E	Q	H	R	Q	L	V	N	D	Y	A	T	R	A	K	I	Y	P	A	Q	L	W	R	Q	V	R	R
Query Conservation																												.
Alig confidence																												.																																															.
Template Conservation																																																																											.
Template Sequence		L	L	P	F	S	P	D	S	V	V	T	H	G	D	F	S	L	D	N	L	I	F	D	E	G	K	L	I	G	C	I	D	V	G	R	V	G	I	A	D	R	Y	Q	D	L	A	I	L	W	N	C	L	G	E	F	S	P	S	L	Q	K	R	L	F	Q	K	Y	G	I	D	N	P	D	.	X	N	K	L	Q	F
Template Known Secondary structure		T												S				G	G	G					T	T									T	T						T												T	T	T													T		S	S			.
Template Predicted Secondary structure																																																																											.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.
		235	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	F	P	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	L	X	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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