Job Description P75948 Confidence 94.45% Date Thu Jan 5 12:16:18 GMT 2012 Rank 124 Aligned Residues 137 % Identity 22% Template c3lxkA_ PDB info PDB header:transferase Chain: A: PDB Molecule:tyrosine-protein kinase jak3; PDBTitle: structural and thermodynamic characterization of the tyk2 and jak32 kinase domains in complex with cp-690550 and cmp-6 Resolution 2.00 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40							.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.							.	.	.	.	90	.
Predicted Secondary structure																		.	.	.	.	.	.																.																															.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.																.																															.	.	.	.	.	.
Query Sequence		V	T	T	F	N	S	G	L	S	G	G	S	F	L	I	E	.	.	.	.	.	.	H	Q	G	Q	R	F	V	V	R	Q	P	H	D	P	D	.	A	P	Q	S	A	F	L	R	Q	Y	R	A	L	S	Q	L	P	A	C	I	A	P	K	P	H	L	Y	L	R	D	.	.	.	.	.	.	W	M	V	V	D	Y
Query Conservation																		.	.	.	.	.	.																.																															.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.																.																															.	.	.	.	.	.
Template Conservation
Template Sequence		I	S	Q	L	G	K	G	N	F	G	S	V	E	L	C	R	Y	D	P	L	G	D	N	T	G	A	L	V	A	V	K	Q	L	Q	H	S	G	P	D	Q	Q	R	D	F	Q	R	E	I	Q	I	L	K	A	L	H	S	D	F	I	V	K	Y	R	G	V	S	Y	G	P	G	R	Q	S	L	R	L	V	M	E	Y
Template Known Secondary structure									T	T										T	T	S	S	S		S									S	S																		T				T	T	B									S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		825	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	G	A	V	K	T	Y	L	P	D	T	N	E	L	A	G	L	L	Y	Y	L	H	Q	Q	P	R	F	G	W	R	I	T	L	L	P	L	L	E	L	Y	W	Q	Q	S	D	P	A	R	R	T	V	G	W	L	R	M	L	K	R	L	R	K	A	R	E	P	R	P	L	R	L	S	P	L	H	M	D	V	H
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.
Template Sequence		L	P	S	G	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	D	F	L	Q	R	H	R	A	R	L	D	A	S	R	L	L	L	Y	S	S	Q	I	C	K	G	M	E	Y	L	G	S	R	R	.	.	.	.	.	C	V	H	R	D	L	A
Template Known Secondary structure			T	T		B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									G	G	G																							T	T	.	.	.	.	.				S			S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.
Template SS confidence
		905	.	.	.	.																													910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.						.	.	.	.	.	950	.
		172	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		A	G	N	L	V	H	S	A	S	G	.	L	K	L	I	D	W	E	Y	A	G	D	G	D
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		A	R	N	I	L	V	E	S	E	A	H	V	K	I	A	D	F	G	L	A	K	L	L	P
Template Known Secondary structure		G	G	G						T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		952	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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