 |
Job Description | P75948 | Confidence | 39.66% | Date | Thu Jan 5 12:16:18 GMT 2012 |
Rank | 263 | Aligned Residues | 71 |
% Identity | 14% | Template | c3kexA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-3; |
PDBTitle: crystal structure of the catalytically inactive kinase2 domain of the human epidermal growth factor receptor 33 (her3)
|
Resolution | 2.80 Å |
|
 |
  |   |
15 | . | . | . | . | 20 | |
|
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | |
|
. | . | . | . | . | . | . | . | . | 50 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
| . | . |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  | . | . |  |
|
|  |  |  |  |  |  |  | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | S | R | F | F | P | . |
. |
Q | Y | H | P | V | T | T | F | N | S | G | L | S | G | G | S | F | L | I | E | . |
. |
H | Q | G | Q | R | F | V | V | R | Q | . |
. |
. |
. |
. |
. |
P | H | D | P | D | A | P | Q | S | A | F | L | R | Q | Y | R | A | L | S | Q | L | P | A | C | I | A | P | K | P | H | L | Y | L | R |
Query Conservation |   |
|   |   |   |   |
| . | . |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |
|   | . | . |   |   |   |   |   |   |
|
|
|   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|   |
|   |
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |
|   |
|
|
|   |   |   |   |   |   |   |
Template Sequence |   |
L | A | R | I | F | K | E | T | E | L | R | K | L | K | V | L | G | S | G | V | F | G | T | V | H | K | G | V | W | I | P | E | G | E | S | I | K | I | P | V | C | I | K | V | I | E | D | K | S | G | R | Q | S | F | Q | A | V | T | D | H | M | L | A | I | G | S | L | D | H | A | H | I | V | R | L | L | G | L | C | P |
Template Known Secondary structure |   |
|
|
| B |
|
| T | T | T |  |  |  |  |  |  |  |  |
|
| S | S |
|  |  |  |  |  |  |  |
|
| T | T |
| S |
|
|  |  |  |  |  |  |  |  |
|
| T | T | S |
| S |
| B |
| S |
|
|  |  |  |  |  |  |  | T |
|
|
| T | T | B |
|
|  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
681 | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 |
  |
  |   |
85 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
D |
Query Conservation |   |
  |
Alig confidence |   |
|
Template Conservation |   |
  |
Template Sequence |   |
G |
Template Known Secondary structure |   |
B |
Template Predicted Secondary structure |   |
|
Template SS confidence |   |
|
  |   |
761 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|