Job Description P75948 Confidence 99.90% Date Thu Jan 5 12:16:18 GMT 2012 Rank 23 Aligned Residues 264 % Identity 11% Template c3i0oA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spectinomycin phosphotransferase; PDBTitle: crystal structure of spectinomycin phosphotransferase,2 aph(9)-ia, in complex with adp and spectinomcyin Resolution 2.40 Å

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		7	.	.	10	.	.	.	.	.					.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure											.	.	.	.																		.	.
Query SS confidence											.	.	.	.																		.	.
Query Sequence		N	P	I	T	R	D	E	L	L	.	.	.	.	S	R	F	F	P	Q	Y	H	P	V	T	T	F	N	S	G	L	.	.	S	G	G	S	F	L	I	E	H	Q	G	Q	R	F	V	V	R	Q	P	H	D	P	D	A	P	Q	S	A	F	L	R	Q	Y	R	A	L	S	Q	L	P	A	C	I	A	P	K	P	H
Query Conservation											.	.	.	.																		.	.
Alig confidence											.	.	.	.																		.	.
Template Conservation
Template Sequence		Q	P	I	Q	A	Q	Q	L	I	E	L	L	K	V	H	Y	G	I	D	I	H	T	A	Q	F	I	Q	G	G	A	D	T	N	A	F	A	Y	Q	A	D	S	E	S	K	S	Y	F	I	K	L	K	Y	G	Y	H	D	E	I	N	L	S	I	I	R	L	L	H	D	S	G	I	K	E	I	I	F	P	I	H	T
Template Known Secondary structure				S																								S				S	S	S									S	S											S	T														T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		81	.	.	.	.									.	.	.	.	90	.	.	.	.	.	.	.					.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure							.	.	.	.	.	.	.	.													.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.													.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Y	L	R	D	.	.	.	.	.	.	.	.	W	M	V	V	D	Y	L	P	G	A	V	K	.	.	.	.	T	Y	L	P	D	T	N	E	L	A	G	L	L	Y	Y	L	H	Q	Q	P	R	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation							.	.	.	.	.	.	.	.													.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.													.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	A	K	L	F	Q	Q	L	K	H	F	K	I	I	A	Y	P	F	I	H	A	P	N	G	F	T	Q	N	L	T	G	K	Q	W	K	Q	L	G	K	V	L	R	Q	I	H	E	T	S	V	P	I	S	I	Q	Q	Q	L	R	K	E	I	Y	S	P	K	W	R	E	I	V	R	S	F	Y	N	Q	I	E	F
Template Known Secondary structure		T	T	S		S	S				S	S	S												B	T	T	T	S																												T	T	S							S											T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		W	R	I	T	L	L	P	L	L	E	L	Y	W	Q	Q	S	D	P	A	R	R	T	V	G	W	L	R	M	L	K	R	L	R	K	A	R	E	P	R	P	L	R	L	S	P	L	H	M	D	V	H	A	G	N	L	V	H	S	A	S	G	.	L	K	L	I	D	W	E	Y	A	G	D	G	D	I	A	L	E	L
Query Conservation																																																															.
Alig confidence																																																															.
Template Conservation
Template Sequence		D	N	S	D	D	K	L	T	A	A	F	K	S	F	F	N	Q	N	S	A	A	I	H	R	L	V	D	T	S	E	K	L	S	K	K	I	Q	P	D	L	D	K	Y	V	L	C	H	S	D	I	H	A	G	N	V	L	V	G	N	E	E	S	I	Y	I	I	D	W	D	E	P	M	L	A	P	K	E	R	D	L
Template Known Secondary structure			S	S															T																						G	G	G						S			S	G	G	G					S	S	S								S							T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		200	.	.	.	.	.	.			.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure									.	.																																																		.
Query SS confidence									.	.																																																		.
Query Sequence		A	A	V	W	V	E	N	.	.	T	E	Q	H	R	Q	L	V	N	D	Y	A	T	R	A	K	I	Y	P	A	Q	L	W	R	Q	V	R	R	W	F	P	W	L	L	M	L	K	A	G	W	F	E	Y	R	W	R	Q	T	G	.	D	Q	Q	F	I	R	L	A	D	D	T	W	R	Q	L	L
Query Conservation									.	.																																																		.
Alig confidence									.	.																						.																												.
Template Conservation																																.
Template Sequence		M	F	I	G	G	G	V	G	N	V	W	N	K	P	H	E	I	Q	Y	F	Y	E	G	Y	G	E	I	N	V	D	.	K	T	I	L	S	Y	Y	R	H	E	R	I	V	E	D	I	A	V	Y	G	Q	D	L	L	S	R	N	Q	N	N	Q	S	R	L	E	S	F	K	Y	F	K	E	M	F
Template Known Secondary structure		T	T	T	T			G	G	G		S																				.																												T	T		S	S											T	T
Template Predicted Secondary structure																																.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions