Job Description P75948 Confidence 89.55% Date Thu Jan 5 12:16:18 GMT 2012 Rank 171 Aligned Residues 134 % Identity 24% Template c3dlsA_ PDB info PDB header:transferase Chain: A: PDB Molecule:pas domain-containing serine/threonine-protein kinase; PDBTitle: crystal structure of human pas kinase bound to adp Resolution 2.30 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.										.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.					.	.	.	.
Predicted Secondary structure																				.	.												.	.	.	.	.	.	.	.	.																																	.	.	.	.
Query SS confidence																				.	.												.	.	.	.	.	.	.	.	.																																	.	.	.	.
Query Sequence		V	T	T	F	N	S	G	L	S	G	G	S	F	L	I	E	H	Q	.	.	G	Q	R	F	V	V	R	Q	P	H	D	.	.	.	.	.	.	.	.	.	P	D	A	P	Q	S	A	F	L	R	Q	Y	R	A	L	S	Q	L	P	A	C	I	A	P	K	P	H	L	Y	L	R	D	.	.	.	.	W	M	V	V
Query Conservation																				.	.												.	.	.	.	.	.	.	.	.																																	.	.	.	.
Alig confidence																				.	.												.	.	.	.	.	.	.	.	.																																	.	.	.	.
Template Conservation
Template Sequence		M	S	P	L	G	S	G	A	F	G	F	V	W	T	A	V	D	K	E	K	N	K	E	V	V	V	K	F	I	K	K	E	K	V	L	E	D	C	W	I	E	D	P	K	L	G	K	V	T	L	E	I	A	I	L	S	R	V	E	H	A	N	I	I	K	V	L	D	I	F	E	N	Q	G	F	F	Q	L	V	M
Template Known Secondary structure						S	S	S	S	S		S							T	T	T	T										S	T	T	S		T	T	S					T	T	T											T	T				T	T	B										S	S
Template Predicted Secondary structure
Template SS confidence
		1002	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	L	P	G	A	V	K	T	Y	L	P	D	T	N	E	L	A	G	L	L	Y	Y	L	H	Q	Q	P	R	F	G	W	R	I	T	L	L	P	L	L	E	L	Y	W	Q	Q	S	D	P	A	R	R	T	V	G	W	L	R	M	L	K	R	L	R	K	A	R	E	P	R	P	L	R	L	S	P	L	H	M	D
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	H	G	S	G	L	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	F	I	D	R	H	P	R	L	D	E	P	L	A	S	Y	I	F	R	Q	L	V	S	A	V	G	Y	L	R	L	K	D	I	I	H	R	D
Template Known Secondary structure					T	T	S		B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T																										T	T				S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1082	.	.	.	.	.	.	.	1090																																		.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		V	H	A	G	N	L	V	H	S	A	S	G	.	L	K	L	I	D	W	E	Y	A	G
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		I	K	D	E	N	I	V	I	A	E	D	F	T	I	K	L	I	D	F	G	S	A	A
Template Known Secondary structure			S	G	G	G					T	T	S								T	T
Template Predicted Secondary structure
Template SS confidence
		1129	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions