Job Description P75948 Confidence 99.93% Date Thu Jan 5 12:16:18 GMT 2012 Rank 18 Aligned Residues 253 % Identity 15% Template c3csvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminoglycoside phosphotransferase; PDBTitle: crystal structure of a putative aminoglycoside phosphotransferase2 (yp_614837.1) from silicibacter sp. tm1040 at 2.15 a resolution Resolution 2.15 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.						.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																													.	.	.	.	.						.
Query SS confidence																													.	.	.	.	.						.
Query Sequence		T	R	D	E	L	L	S	R	F	F	P	Q	Y	H	P	V	T	T	F	N	S	G	L	S	G	G	S	.	.	.	.	.	F	L	I	E	H	.	Q	G	Q	R	F	V	V	R	Q	P	H	D	P	D	A	P	Q	S	A	F	L	R	Q	Y	R	A	L	S	Q	L	P	A	C	I	A	P	K	P	H	L	Y	L
Query Conservation																													.	.	.	.	.						.
Alig confidence														.	.	.	.	.	.	.	.								.	.	.	.	.						.
Template Conservation														.	.	.	.	.	.	.	.
Template Sequence		S	R	E	D	E	I	R	D	F	L	A	T	.	.	.	.	.	.	.	.	H	G	Y	A	D	W	N	R	T	P	R	Y	Q	R	L	R	S	P	T	G	A	K	A	V	L	X	D	W	S	P	E	E	G	G	D	T	Q	P	F	V	D	L	A	Q	Y	L	R	N	L	D	I	S	A	P	E	I	Y	A	E	E
Template Known Secondary structure														.	.	.	.	.	.	.	.	T	T		T	T													T	T											T	T	T	T			S													T	T		B
Template Predicted Secondary structure														.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.									.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		84	.												.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.								.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.
Query Sequence		R	D	.	.	.	.	.	.	.	.	.	.	.	W	M	V	V	D	Y	L	P	G	A	V	K	T	Y	L	P	D	T	N	E	L	A	G	L	L	Y	Y	L	H	Q	Q	P	R	F	G	W	R	I	T	L	L	P	L	.	.	.	.	.	.	.	L	E	L	Y	W	Q	Q	S	D	P	A	R	R	T	V	G	W
Query Conservation				.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	A	R	G	L	L	L	I	E	D	L	G	D	A	L	F	T	E	V	I	N	N	D	P	A	Q	E	X	P	L	Y	R	A	A	V	D	L	L	I	H	L	H	D	A	Q	T	P	E	L	A	R	L	D	P	E	T	L	S	E	X	T	R	L	A	F	S	E	Y	R	Y	A	I	L	G	D	A	A	E	D	N
Template Known Secondary structure		T	T	T	T									S		B									G	G	G																	T	S							B									T	T	T					T							S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.						.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.						210	.	.	.
Predicted Secondary structure															.	.																								.	.	.	.	.																													.	.	.	.	.
Query SS confidence															.	.																								.	.	.	.	.																													.	.	.	.	.
Query Sequence		L	R	M	L	K	R	L	R	K	A	R	E	P	.	.	R	P	L	R	L	S	P	L	H	M	D	V	H	A	G	N	L	V	H	S	A	S	G	.	.	.	.	.	L	K	L	I	D	W	E	Y	A	G	D	G	D	I	A	L	E	L	A	A	V	W	V	E	N	T	E	Q	.	.	.	.	.	H	R	Q	L
Query Conservation															.	.																								.	.	.	.	.																													.	.	.	.	.
Alig confidence															.	.																								.	.	.	.	.																													.	.	.	.	.
Template Conservation
Template Sequence		R	K	R	F	E	H	R	F	A	Q	I	L	S	A	Q	L	E	G	D	X	V	F	V	H	R	D	F	H	A	Q	N	L	L	W	L	P	E	R	E	G	L	A	R	V	G	V	I	D	F	Q	D	A	K	L	G	H	R	A	Y	D	L	V	S	L	L	Q	D	A	R	R	D	V	P	A	Q	V	E	A	Q	X
Template Known Secondary structure																			S							S			S	G	G	G					T	T	S		G	G	G	G							T	T						T	T								S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	D	Y	A	T	R	A	K	I	Y	P	A	Q	L	W	R	Q	V	R	R	W	F	P	W	L	L	M	L	K	A	G	W	F	E	Y	R	W	R	Q	T	G	D	Q	Q	F	I	R	L	A	D	D	T	W	R	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	H	Y	I	Q	A	T	G	V	D	E	S	H	F	R	S	A	Y	A	V	I	A	V	Q	R	N	X	R	I	L	G	I	F	A	R	L	S	Q	R	F	G	K	R	H	Y	I	E	F	V	P	R	V	W	A	H	F
Template Known Secondary structure										T																															T	T			G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions