Job Description P75948 Confidence 100.00% Date Thu Jan 5 12:16:18 GMT 2012 Rank 4 Aligned Residues 261 % Identity 17% Template c3c5iD_ PDB info PDB header:transferase Chain: D: PDB Molecule:choline kinase; PDBTitle: crystal structure of plasmodium knowlesi choline kinase, pkh_134520 Resolution 2.20 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.								.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.											.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.
Query Sequence		N	P	I	T	R	D	E	L	L	S	R	F	F	P	Q	Y	.	.	.	.	.	.	.	H	P	V	T	T	F	N	S	G	L	S	G	G	S	F	L	I	E	H	Q	G	Q	.	.	.	.	.	.	.	.	.	.	R	F	V	V	R	Q	P	H	D	P	D	A	P	Q	S	A	F	L	R	Q	Y	R	A	L	S
Query Conservation																		.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.							.	.															.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.
Template Sequence		D	P	L	Y	I	K	K	I	C	L	E	K	V	P	E	W	N	H	F	T	E	D	N	L	R	V	K	Q	I	.	.	L	L	T	N	Q	L	F	E	V	G	L	K	E	E	T	A	N	N	Y	N	S	I	R	T	R	V	L	F	R	I	Y	G	K	H	V	D	E	L	Y	N	T	I	S	E	F	E	V	Y	K
Template Known Secondary structure															G	G	G	T	T			G	G	G							.	.				S															S	T	T	S											T	T	G	G	G	T	S
Template Predicted Secondary structure																															.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100						.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.								.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure				.																														.	.	.	.	.																	.	.	.	.	.	.	.
Query SS confidence				.																														.	.	.	.	.																	.	.	.	.	.	.	.
Query Sequence		Q	L	.	P	A	C	I	A	P	K	P	H	L	Y	L	R	D	W	M	V	V	D	Y	L	P	G	A	V	K	T	Y	L	.	.	.	.	.	P	D	T	N	E	L	A	G	L	L	Y	Y	L	H	Q	Q	.	.	.	.	.	.	.	P	R	F	G	W	R	I	T	L	L	P	L	L	E	L	Y	W	Q	Q	S
Query Conservation				.																														.	.	.	.	.																	.	.	.	.	.	.	.
Alig confidence				.																														.	.	.	.	.																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	M	S	K	Y	K	I	A	P	Q	L	L	N	T	F	N	G	G	R	I	E	E	W	L	Y	G	D	P	L	R	I	D	D	L	K	N	P	T	I	L	I	G	I	A	N	V	L	G	K	F	H	T	L	S	R	K	R	H	L	P	E	H	W	D	R	T	P	C	I	F	K	M	M	E	K	W	K	N	Q	L
Template Known Secondary structure						T	T	S	S								T	T									S					G	G	G	G	G																	T					S				T	T	S			S
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		137	.	.	140	.	.														.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	P	A	R	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	W	L	R	M	L	K	R	L	R	K	A	R	E	P	R	P	L	R	L	S	P	L	H	M	D	V	H	A	G	N	L	V	H	S	A	S	G	L	K	L	I	D	W	E	Y	A	G	D	G	D	I	A	L	E	L	A	A	V	W
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	K	Y	K	N	I	E	K	Y	N	C	D	I	H	K	Y	I	K	E	S	D	K	F	I	K	F	M	K	V	Y	S	K	S	D	N	L	A	N	T	I	V	F	C	H	N	D	L	Q	E	N	N	I	I	N	T	N	K	C	L	R	L	I	D	F	E	Y	S	G	F	N	F	L	A	T	D	I	A	N	F	F
Template Known Secondary structure		T	T	S	T	T	G	G	G	T		S	S																			T	T	S			G	G	G							S			S	G	G	G					S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		204	.																						.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.								.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Query Sequence		V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	E	Q	H	R	Q	L	V	N	D	Y	A	T	R	A	K	I	Y	P	.	.	.	.	.	.	.	A	Q	L	W	R	Q	V	R	R	W	F	P	W	L	L	M	L	K	A	G	W	F	E	Y	R	W	R	Q	T	G
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	E	T	S	I	D	Y	S	V	S	S	Y	P	F	F	E	I	D	K	K	K	Y	I	S	Y	E	N	R	K	L	F	I	T	A	Y	L	S	N	Y	L	D	K	V	V	P	T	P	K	L	I	D	E	I	L	E	A	V	E	V	Q	A	L	G	A	H	L	L	W	G	F	W	S	I	I	R	G	Y	Q	T	K
Template Known Secondary structure				T	T							S	T	T	S					G	G	G	S																		S																																						S
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		256	.				.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.
Query SS confidence				.	.	.
Query Sequence		D	Q	.	.	.	Q	F	I	R	L	A	D	D	T	W	R	Q
Query Conservation				.	.	.
Alig confidence				.	.	.
Template Conservation
Template Sequence		S	Y	N	E	F	D	F	F	L	Y	A	E	Q	R	L	K	M
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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