Job Description P75948 Confidence 99.93% Date Thu Jan 5 12:16:18 GMT 2012 Rank 19 Aligned Residues 259 % Identity 16% Template c3attA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of rv3168 with atp Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.							.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40									.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure													.	.	.	.	.	.																			.	.	.	.	.	.	.	.																		.	.	.	.																.
Query SS confidence													.	.	.	.	.	.																			.	.	.	.	.	.	.	.																		.	.	.	.																.
Query Sequence		D	E	L	L	S	R	F	F	P	Q	Y	.	.	.	.	.	.	H	P	V	T	T	F	N	S	G	L	S	G	G	S	F	L	I	E	.	.	.	.	.	.	.	.	H	Q	G	Q	R	F	V	V	R	Q	P	H	D	P	D	A	P	.	.	.	.	Q	S	A	F	L	R	Q	Y	R	A	L	S	Q	L	P	.
Query Conservation													.	.	.	.	.	.																			.	.	.	.	.	.	.	.																		.	.	.	.																.
Alig confidence													.	.	.	.	.	.																			.	.	.	.	.	.	.	.																		.	.	.	.																.
Template Conservation
Template Sequence		S	R	W	L	S	S	V	L	P	G	G	A	A	P	E	V	T	V	E	S	G	V	D	S	T	G	M	S	S	E	T	I	I	L	T	A	R	W	Q	Q	D	G	R	S	I	Q	Q	K	L	V	A	R	V	A	P	A	A	E	D	V	P	V	F	P	T	Y	R	L	D	H	Q	F	E	V	I	R	L	V	G	E
Template Known Secondary structure									S		T	T													T	T	S															T	T															G	G	G			S	S	S
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
				73	.	.	.	.	.	.	80	.	.								.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100																				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure		.	.											.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.											.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	A	C	I	A	P	K	P	H	L	Y	.	.	.	.	.	.	.	L	R	D	W	M	V	V	D	Y	L	P	G	A	V	K	T	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	T	N	E	L	A	G	L	L	Y	Y	L	H	Q	Q	P	R	F	G	W	R	I	T
Query Conservation		.	.											.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.											.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	D	V	P	V	P	R	V	R	W	I	E	T	T	G	D	V	L	G	T	P	F	F	L	M	D	Y	V	E	G	V	V	P	P	D	V	M	P	Y	T	F	G	D	N	W	F	A	D	A	P	A	E	R	Q	R	Q	L	Q	D	A	T	V	A	A	L	A	T	L	H	S	I	P	N	A	Q	N	T	F	S
Template Known Secondary structure																S	S	T	T	T	S	S											B				T	T	T	T	G	G	G	S		S	T	T	T	T	S																					T		S	S					T	G
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		125	.										.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.				.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.																																	.	.	.																								.
Query SS confidence				.	.	.	.	.	.	.	.	.																																	.	.	.																								.
Query Sequence		L	L	.	.	.	.	.	.	.	.	.	P	L	L	E	L	Y	W	Q	Q	S	D	P	A	R	R	T	V	G	W	L	R	M	L	K	R	L	R	K	A	R	E	P	.	.	.	R	P	L	R	L	S	P	L	H	M	D	V	H	A	G	N	L	V	H	S	A	S	G	.	L	K	L	I	D	W	E	Y	A	G
Query Conservation				.	.	.	.	.	.	.	.	.																																	.	.	.																								.
Alig confidence				.	.	.	.	.	.	.	.	.																																	.	.	.																								.
Template Conservation
Template Sequence		F	L	T	D	T	T	L	H	R	H	F	N	W	V	R	S	W	Y	D	F	A	V	E	G	I	G	R	S	P	L	L	E	R	T	F	E	W	L	Q	S	H	W	P	D	D	A	A	A	R	E	P	V	L	L	W	G	D	A	R	V	G	N	V	L	Y	R	D	F	Q	P	V	A	V	L	D	W	E	M	V	A
Template Known Secondary structure		G	G																																							T								S							S	S		S	G	G	G					T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.																		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.				.	250	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.
Query Sequence		D	G	D	I	A	L	E	L	A	A	V	W	V	E	N	T	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	R	Q	L	V	N	D	Y	A	T	R	A	K	I	Y	P	A	Q	L	W	R	Q	V	R	R	W	F	P	W	L	L	M	L	K	A	G	W	F	E	.	.	.	Y	R	W
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.																		.	.	.
Template Conservation																																																							.	.	.	.
Template Sequence		L	G	P	R	E	L	D	V	A	W	M	I	F	A	H	R	V	F	Q	E	L	A	G	L	A	T	L	P	G	L	P	E	V	M	R	E	D	D	V	R	A	T	Y	Q	A	L	T	G	V	E	L	G	D	.	.	.	.	L	H	W	F	Y	V	Y	S	G	V	M	W	A	C	V	F	M	R	T	G	A	R	R
Template Known Secondary structure																										T	T					T	T	T	T																				.	.	.	.	S
Template Predicted Secondary structure																																																							.	.	.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.					.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		252	.	.	.	.	.	.	.							260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.
Query Sequence		R	Q	T	G	D	Q	Q	F	.	.	.	.	.	.	I	R	L	A	D	D	T	W	R	Q	L	L	I	K	Q
Query Conservation										.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.
Template Conservation
Template Sequence		V	H	F	G	E	I	E	K	P	D	D	V	E	S	L	F	Y	H	A	G	L	M	K	H	L	L	G	E	E
Template Known Secondary structure				T	T	S	S				S	S	G	G	G	G		T	T									T
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions