Job Description P75948 Confidence 99.84% Date Thu Jan 5 12:16:18 GMT 2012 Rank 25 Aligned Residues 233 % Identity 17% Template c2q83A_ PDB info PDB header:transferase Chain: A: PDB Molecule:ytaa protein; PDBTitle: crystal structure of ytaa (2635576) from bacillus subtilis at 2.50 a2 resolution Resolution 2.50 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		D	E	L	L	S	R	F	F	P	Q	Y	H	P	V	T	T	F	N	S	G	L	S	G	G	S	F	L	I	E	H	Q	G	Q	R	F	V	V	R	Q	P	H	D	P	D	A	P	Q	S	A	F	L	R	Q	Y	R	A	L	S	Q	L	P	A	C	I	A	P	K	P	H	L	Y	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.																				.	.	.																												.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.																				.	.	.
Template Sequence		E	N	V	L	Q	G	W	D	V	Q	A	E	K	I	D	V	I	Q	.	.	.	.	A	L	V	W	K	V	H	T	D	S	G	A	V	C	L	K	R	I	H	.	.	.	R	P	E	K	K	A	L	F	S	I	F	A	Q	D	Y	L	A	K	K	G	X	N	V	P	G	I	L	P	N	K	K	G	S	L	Y	S
Template Known Secondary structure					G	G	G	S												.	.	.	.									T	T										.	.	.	S																			T		S	S			B				T	T	S		S
Template Predicted Secondary structure																				.	.	.	.																				.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.					.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
					83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.																		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure		.	.	.																					.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																					.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	L	R	D	W	M	V	V	D	Y	L	P	G	A	V	K	T	Y	L	P	D	.	.	T	N	E	L	A	G	L	L	Y	Y	L	H	Q	Q	P	R	F	G	W	R	I	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	L	L	E	L	Y	W	Q	Q	S	D	P	A	R
Query Conservation		.	.	.																					.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																					.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	H	G	S	F	L	F	V	V	Y	D	W	I	E	G	R	P	F	E	L	T	V	K	Q	D	L	E	F	I	X	K	G	L	A	D	F	H	T	A	S	V	G	Y	Q	P	P	N	G	V	P	I	F	T	K	L	G	R	W	P	N	H	Y	T	K	R	C	K	Q	X	E	T	W	K	L	X	A	E	A	E	K
Template Known Secondary structure				T	T												B				T	T	S																			T	T					T	T					B		T	T																								S
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		141	.	.	.	.	.	.	.	.	150	.	.																				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Query Sequence		R	T	V	G	W	L	R	M	L	K	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	K	A	R	E	P	R	P	L	R	L	S	P	L	H	M	D	V	H	A	G	N	L	V	H	S	A	S	G	.	L	K	L	I	D	W	E	Y	A	G	D	G	D	I	A	L	E	L	A
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation
Template Sequence		E	D	P	F	S	Q	L	Y	L	Q	E	I	D	G	F	I	E	D	G	L	R	I	K	D	R	L	L	Q	S	T	Y	V	P	W	T	E	Q	L	K	K	S	P	N	L	C	H	Q	D	Y	G	T	G	N	T	L	L	G	E	N	E	Q	I	W	V	I	D	L	D	T	V	S	F	D	L	P	I	R	D	L	R
Template Known Secondary structure		S																												T	T											S						S	S		S	T	T	S					G	G	G								T	T						T
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		201	.	.									.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.
Query Sequence		A	V	W	.	.	.	.	.	.	.	.	V	E	N	T	E	Q	H	R	Q	L	V	N	D	Y	A	T	R	A	K	I	Y	P	A	Q	L	W	R	Q	V	R	R	W	F	P	W	L	L	M	L	K	A	G	W	F	E	Y	R	W	R	Q	T	G
Query Conservation					.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation																																					.	.	.	.
Template Sequence		K	X	I	I	P	L	L	D	T	T	G	V	W	D	D	E	T	F	N	V	X	L	N	A	Y	E	S	R	A	P	L	T	E	E	Q	.	.	.	.	K	Q	V	X	F	I	D	X	L	F	P	Y	E	L	Y	D	V	I	R	E	K	Y	V	R
Template Known Secondary structure								T			S	S																		S							.	.	.	.										S													T	S
Template Predicted Secondary structure																																					.	.	.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.					.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions