Job Description P75948 Confidence 99.92% Date Thu Jan 5 12:16:18 GMT 2012 Rank 21 Aligned Residues 200 % Identity 15% Template c2pywA_ PDB info PDB header:transferase Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: structure of a. thaliana 5-methylthioribose kinase in complex with adp2 and mtr Resolution 1.90 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.															.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.								.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.
Query Sequence		F	R	S	N	N	P	I	T	R	D	E	L	L	S	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	Q	Y	H	P	V	T	T	F	N	S	G	L	S	G	G	S	F	L	I	E	H	Q	G	Q	R	F	V	V	R	Q	P	.	.	.	.	.	.	.	H	D	P	D	A	P	Q	S	A	F
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	E	E	F	T	P	L	N	E	K	S	L	V	D	Y	I	K	S	T	P	A	L	S	S	K	I	G	A	D	K	S	D	D	D	L	V	I	K	E	V	G	D	G	N	L	N	F	V	F	I	V	V	G	S	S	G	S	L	V	I	K	Q	A	L	P	Y	I	R	C	I	G	E	S	W	P	M	T	K	E	R
Template Known Secondary structure				S						T	T								T									T	T	T	T													S	S	S									S	S										S	B		T	T	T		T	T	S	B			T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		62	.		.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.			.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.											.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure				.											.	.	.									.	.																	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.											.	.	.									.	.																	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	.	Q	Y	R	A	L	S	Q	L	P	A	.	.	.	C	I	A	P	K	P	H	L	.	.	Y	L	R	D	W	M	V	V	D	Y	L	P	G	A	V	K	.	.	.	.	.	.	.	.	.	.	T	Y	L	P	D	T	N	E	L	A	G	L	L	Y	Y	L	H	Q	Q	P	R	F	G	W	R	I	T	L
Query Conservation				.											.	.	.									.	.																	.	.	.	.	.	.	.	.	.	.
Alig confidence				.											.	.	.									.	.																	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																																																																											.
Template Sequence		A	Y	F	E	A	T	T	L	R	K	H	G	N	L	S	P	D	H	V	P	E	V	Y	H	F	D	R	T	M	A	L	I	G	M	R	Y	L	E	P	P	H	I	I	L	R	K	G	L	I	A	G	I	E	Y	P	F	L	A	D	H	M	S	D	Y	M	A	K	T	L	F	F	T	S	.	L	L	Y	H	D	T
Template Known Secondary structure																S	G	G	G	S								T	T	T	T									T	T											T				T	T															T	T	S	.	T	T	T	S
Template Predicted Secondary structure																																																																											.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.
		126	.	.	.	130	.	.	.	.	.	.																																				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	L	L	E	L	Y	W	Q	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	A	R	R	T	V	G	W	L	R	M	L	K	R	L	R	K	A	R	E	P	R	P	L	R	L	S	P	L	H	M	D	V
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation																																																																							.	.
Template Sequence		T	E	H	R	R	A	V	T	E	F	C	G	N	V	E	L	C	R	L	T	E	Q	V	V	F	S	D	P	Y	R	V	S	T	F	N	R	W	T	S	P	Y	L	D	D	D	A	K	A	V	R	E	D	S	A	L	K	L	E	I	A	E	L	K	S	M	F	C	E	R	.	.	A	Q	A	L	I	H	G	D	L
Template Known Secondary structure												G	G	G											T	T	T	G	G	G	S			T	T				S	T	T	T	T								T	T																			.	.							S
Template Predicted Secondary structure																																																																							.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230			.	.	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	G	N	L	V	H	S	A	S	G	L	K	L	I	D	W	E	Y	A	G	D	G	D	I	A	L	E	L	A	A	V	W	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	T	G	S	V	M	V	T	Q	D	S	T	Q	V	I	D	P	E	F	S	F	Y	G	P	M	G	F	D	I	G	A	Y	L	G	N
Template Known Secondary structure		S	G	G	G					S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions