Job Description P75948 Confidence 100.00% Date Thu Jan 5 12:16:18 GMT 2012 Rank 1 Aligned Residues 252 % Identity 17% Template c2ig7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:choline/ethanolamine kinase; PDBTitle: crystal structure of human choline kinase b Resolution 1.80 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.										.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.																												.
Query SS confidence																															.	.	.	.	.	.	.	.	.																												.
Query Sequence		S	R	F	F	P	Q	Y	H	P	V	T	T	F	N	S	G	L	S	G	G	S	F	L	I	E	H	Q	G	Q	.	.	.	.	.	.	.	.	.	R	F	V	V	R	Q	P	H	D	P	D	A	P	Q	S	A	F	L	R	Q	Y	R	A	L	S	Q	L	.	P	A	C	I	A	P	K	P	H	L	Y	L	R	D
Query Conservation																															.	.	.	.	.	.	.	.	.																												.
Alig confidence																															.	.	.	.	.	.	.	.	.																												.
Template Conservation
Template Sequence		R	R	V	Q	P	E	E	L	R	V	Y	P	V	S	G	G	L	S	N	L	L	F	R	C	S	L	P	D	H	L	P	S	V	G	E	E	P	R	E	V	L	L	R	L	Y	G	A	I	L	Q	G	V	D	S	L	V	L	E	S	V	X	F	A	I	L	A	E	R	S	L	G	P	Q	L	Y	G	V	F	P	E
Template Known Secondary structure		G	T			T	T	T									T	T	T										T	T	S			S	S	S			S									G	G	G		S																	T	T	S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.						.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.					.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.																							.	.																			.	.	.	.
Query SS confidence																			.	.	.	.	.																							.	.																			.	.	.	.
Query Sequence		W	M	V	V	D	Y	L	P	G	A	V	K	T	Y	L	P	D	.	.	.	.	.	T	N	E	L	A	G	L	L	Y	Y	L	H	Q	Q	P	R	F	G	W	R	I	T	.	.	L	L	P	L	L	E	L	Y	W	Q	Q	S	D	P	A	R	R	T	.	.	.	.	V	G	W	L	R	M	L	K	R	L	R	K
Query Conservation																			.	.	.	.	.																							.	.																			.	.	.	.
Alig confidence																			.	.	.	.	.																							.	.																			.	.	.	.
Template Conservation
Template Sequence		G	R	L	E	Q	Y	I	P	S	R	P	L	K	T	Q	E	L	R	E	P	V	L	S	A	A	I	A	T	K	X	A	Q	F	H	G	X	E	X	P	F	T	K	E	P	H	W	L	F	G	T	X	E	R	Y	L	K	Q	I	Q	D	L	P	X	N	L	L	E	X	Y	S	L	K	D	E	X	G	N	L	R	K
Template Known Secondary structure															G	G	G	G	G	S																T				S	S			S																	T									T	T
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.																						.	.	.	210	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	R	E	P	R	P	L	R	L	S	P	L	H	M	D	V	H	A	G	N	L	V	H	S	A	S	G	L	K	L	I	D	W	E	Y	A	G	D	G	D	I	A	L	E	L	A	A	V	W	V	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	Q	H	R	Q	L
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.
Template Sequence		L	L	E	S	T	P	S	P	V	V	F	C	H	N	D	I	Q	E	G	N	I	L	L	L	S	.	.	L	X	L	V	D	F	E	Y	S	S	Y	N	Y	R	G	F	D	I	G	N	H	F	C	E	W	V	Y	D	Y	T	H	E	E	W	P	F	Y	K	A	R	P	T	D	Y	P	T	Q	E	Q	Q	L	H	F
Template Known Secondary structure					T	S									S				G	G	G						.	.						G	G	G																G	G	G			T	T		S	S	T	T	S					G	G	G	S
Template Predicted Secondary structure																											.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.			.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.												.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.																															.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.																															.
Query Sequence		V	N	D	Y	A	T	R	A	K	I	Y	P	.	.	.	.	.	.	.	.	.	.	.	A	Q	L	W	R	Q	V	R	R	W	F	P	W	L	L	M	L	K	A	G	W	F	E	Y	R	W	R	Q	T	G	.	D	Q	Q	F	I	R	L	A	D	D	T	W	R	Q
Query Conservation														.	.	.	.	.	.	.	.	.	.	.																															.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.																															.
Template Conservation
Template Sequence		I	R	H	Y	L	A	E	A	K	K	G	E	T	L	S	Q	E	E	Q	R	K	L	E	E	D	L	L	V	E	V	S	R	Y	A	L	A	S	H	F	F	W	G	L	W	S	I	L	Q	A	S	X	S	T	I	E	F	G	Y	L	D	Y	A	Q	S	R	F	Q	F
Template Known Secondary structure										T	T	T																																											S		S
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions