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Job DescriptionP75948
Confidence98.86%DateThu Jan 5 12:16:18 GMT 2012
Rank28Aligned Residues154
% Identity15%Templatec1tqmA_
PDB info PDB header:ribosomeChain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: crystal structure of a. fulgidus rio2 serine protein kinase bound to2 amppnp
Resolution1.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40. ........50...... ...60.........70.........80.........90.......
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Query Sequence  VTTFNSGLSGGSFLIEH. QGQRFVVRQPHDPDA. . . . . . PQSAFLRQYRALSQLPACIAPKPHLYLRDWMVVDYLPGAVK
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Template Sequence  GKLMGEGKESAVFNCYSEKFGECVVKFHKVKVKEHFSVLAIRSARNEFRALQKLQGLAVPKVYAWEGNAVLMELIDAKEL
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SSTTT






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TT



G
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   95....100.........110.........120.........130.........140.........150.........160.........170....
 
   98.100.........110.........120.........130.........140.........150.........160.........170.......
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Query Sequence  TYLPDTNELAGLLYYLHQQPRFGWRITLLPLLELYWQQSDPARRTVGWLRMLKRLRKAREPRPLRLSPLHMDVHAGNLVH
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Template Sequence  YRVRV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ENPDEVLDMILEEVAKFYHRG. . . . IVHGDLSQYNVLV
Template Known Secondary structure  GG


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TTT
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   188.190.. .......200.........210... ......220......
 
   178.180.........190. ........200.........210.........220....
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Query Sequence  SASGLKLIDWEYAG. DGDIALELAAVWVENTEQHRQLVNDYATRAKIY
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Template Sequence  SEEGIWIIDFPQSVEVGEE. . . . . GWREILERDVRNIITYFSRTYRTE
Template Known Secondary structure  TT


TT
TTST.....T


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   227..230.........240..... ....250.........260.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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