Return to main results Retrieve Phyre Job Id

Job DescriptionP77223
Confidence99.46%DateThu Jan 5 12:26:34 GMT 2012
Rank12Aligned Residues83
% Identity33%Templated2c42a5
SCOP infoFerredoxin-like 4Fe-4S ferredoxins Ferredoxin domains from multidomain proteins
Resolution1.78

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   99100.........110.........120.........130..... ....140.........150..
Predicted Secondary structure 

























..........................










Query SS confidence 




































. . . . . . . . . . . . . . . . . . . . . . . . . .
















Query Sequence  EAQEITPARMVAVIDENNCIGCTKCIQACPVDAIVGA. . . . . . . . . . . . . . . . . . . . . . . . . . TRAMHTVMSDLCTGCNL
Query Conservation               
    
 


 
   

  

   ..........................      
    
 


 
Alig confidence 




































..........................
















Template Conservation    

       
  
 
 

 

 
   

  

                                   
    
 


 
Template Sequence  QFEKRGVAINVPQWVPENCIQCNQCAFVCPHSAILPVLAKEEELVGAPANFTALEAKGKELKGYKFRIQINTLDCMGCGN
Template Known Secondary structure  GGT




S
TTT





SS


GGGGTT

TT




SGGGTT

TTT




Template Predicted Secondary structure 



























































Template SS confidence 















































































   671........680.........690.........700.........710.........720.........730.........740.........750
 
   153......160 ......... 170.........180..
Predicted Secondary structure 



..



....








Query SS confidence 







. .








. . . .












Query Sequence  CVDPCPTH. . CISLQPVAE. . . . TPDSWKWDLNTIP
Query Conservation 
   

  ..

   
   ....             
Alig confidence 







..








....






.




Template Conservation 
   

    

 
                .     
Template Sequence  CADICPPKEKALVMQPLDTQRDAQVPNLEY. AARIP
Template Known Secondary structure 
SSSS
SGGGT.T

Template Predicted Secondary structure 







.


Template SS confidence 



































   751........760.........770.........780 .....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions