 |
Job Description | P77223 | Confidence | 99.37% | Date | Thu Jan 5 12:26:34 GMT 2012 |
Rank | 22 | Aligned Residues | 66 |
% Identity | 24% | Template | d1rgva_ |
SCOP info | Ferredoxin-like
| 4Fe-4S ferredoxins
| Short-chain ferredoxins
|
Resolution | 2.90 |
|
 |
  |   |
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . |
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | V | I | D | E | N | N | C | I | G | C | T | K | C | I | Q | A | C | P | V | D | A | I | V | G | A | T | R | A | M | H | T | V | M | S | D | L | C | T | G | C | . |
. |
. |
. |
. |
. |
N | L | C | V | D | P | C | P | T | H | C | I | S | L | Q | P | V | A | E | T | P | D | S | W | K | W |
Query Conservation |   |
  |   |
|   |   |   |   |
|   |
|
|
|   |
|   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
| . | . | . | . | . | . |
|   |
|   |   |   |
|
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|
|
|
|   |
|
|   |
|   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   | . |   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|
|   |
|   |   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
A | L | Y | I | N | D | D | C | T | A | C | D | A | C | V | E | E | C | P | N | E | A | I | T | P | G | D | P | I | Y | V | . |
I | D | P | T | K | C | S | E | C | V | G | A | F | D | E | P | Q | C | R | L | V | C | P | A | D | C | I | P | D | N | P | D | Y | R | E | T | R | E | E | L | Q |
Template Known Secondary structure |   |
| B |
|
|
| S |
|
|
|
|
|
| T | T | T | T | T |
| T | T |
|
|  |  |
|
| S | S | S |
|  | . |  |
| T | T | T |
|
| T | T | T | T | T |
| S | S |
|  |  |  |  |  |
| S | S |
|
|
|
| B |
| G | G | G |
|
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |  | . |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | |
. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|