Return to main results Retrieve Phyre Job Id

Job DescriptionP77223
Confidence20.66%DateThu Jan 5 12:26:34 GMT 2012
Rank80Aligned Residues31
% Identity6%Templatec3cpiH_
PDB info PDB header:protein transportChain: H: PDB Molecule:rab gdp-dissociation inhibitor; PDBTitle: crystal structure of yeast rab-gdi
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20...... ...30........
Predicted Secondary structure 

.




Query SS confidence 


















.











Query Sequence  VAAVSLLGLAFGAILGYAS. RRFAVEDDPVVE
Query Conservation 
      

  
  

 

.
 
 

 

 
 
Alig confidence 


















.











Template Conservation 




  

  
  

  
  




     
Template Sequence  VLGTGITECILSGLLSVDGKKVLHIDKQDHYG
Template Known Secondary structure 

STT


SSSSS
Template Predicted Secondary structure 











Template SS confidence 































   14.....20.........30.........40.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions