 |
Job Description | P0AFU8 | Confidence | 5.00% | Date | Thu Jan 5 11:27:19 GMT 2012 |
Rank | 86 | Aligned Residues | 21 |
% Identity | 14% | Template | c3bboT_ |
PDB info |
PDB header:ribosome | Chain: T: PDB Molecule:ribosomal protein l21; |
PDBTitle: homology model for the spinach chloroplast 50s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome
|
Resolution | 9.40 Å |
|
  |   |
73 | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | G | D | L | K | V | G | D | W | V | N | V | E | R | A | A | K | F | S | D | E |
Query Conservation |   |
|   |   |
|   |   |
|   |   |
|
|
|
|
|
|
|   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |
|   |   |
|   |
|   |   |
|
|   |
|   |   |   |
Template Sequence |   |
L | K | G | A | T | V | N | D | K | I | V | L | N | K | V | L | L | V | G | T | K |
Template Known Secondary structure |   |
| T | T | S |
| T | T |
|  |  |  |
| T | T |
|
|
| B |
| S | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
147 | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|