Job Description P0AFU8 Confidence 13.70% Date Thu Jan 5 11:27:19 GMT 2012 Rank 33 Aligned Residues 79 % Identity 10% Template c2khiA_ PDB info PDB header:ribosomal protein Chain: A: PDB Molecule:30s ribosomal protein s1; PDBTitle: nmr structure of the domain 4 of the e. coli ribosomal2 protein s1 Resolution UNK

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		D	H	M	L	D	G	L	E	T	G	A	S	V	A	H	N	G	C	C	L	T	V	T	E	I	N	G	N	H	V	S	F	D	L	M	K	E	T	L	R	I	T	N	L	G	D	L	K	.	V	G	D	W	V	N	V	E	R	A	A	K	F	S	D	E	I	G	G	H	L	M	S	G	H	I	M	T	T	A	E
Query Conservation																																																		.
Alig confidence																	.	.	.	.	.																													.																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	I	A	K	R	Y	P	E	G	T	K	L	T	G	.	.	.	.	.	R	V	T	N	L	T	D	Y	G	C	F	V	E	I	E	E	G	V	E	G	L	V	H	V	S	E	M	D	W	T	N	K	N	I	H	P	S	K	V	V	N	V	G	D	V	V	.	.	.	.	.	.	.	.	.	.	.	E	V	M
Template Known Secondary structure				S	S		S	S		S	S						.	.	.	.	.							T	T							S	T	T							T	T	S	S	S		S	S	T	T		S	S	T	T	T			T	T				.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.						.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.												.	330	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	K	I	L	T	S	E	N	N	R	Q	I	W	F	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	D	I	D	E	E	R	R	R	I	S	L	G	L	K
Template Known Secondary structure							T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions