 |
Job Description | P0AFU8 | Confidence | 6.30% | Date | Thu Jan 5 11:27:19 GMT 2012 |
Rank | 72 | Aligned Residues | 60 |
% Identity | 17% | Template | c1t5aB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:pyruvate kinase, m2 isozyme; |
PDBTitle: human pyruvate kinase m2
|
Resolution | 2.80 Å |
|
 |
  |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
|
. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
| . | . |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | P | N | F | R | T | H | V | V | E | L | P | D | H | M | L | D | G | L | E | T | G | A | S | V | A | H | N | G | . |
. |
C | C | L | T | V | T | E | I | N | G | N | H | V | S | F | D | L | M | K | E | T | L | R | I | T | N | L | G | D | L | K | V | G | D | W | V | N | V | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|
|
|   |   |
|   |
|   |   |
|   |   |
|   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |
|   |   |   |   | . |
|   |   |   |
|   |   |
|
|   |
|
|
|
|
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   | . | . | . | . | . | . | . |
|   |
|   |
|   |
|
|
|
|   |
|
Template Sequence |   |
K | C | D | E | N | I | L | W | L | D | Y | K | N | . |
I | C | K | V | V | E | V | G | S | K | I | Y | V | D | D | G | L | I | S | L | Q | V | K | Q | K | G | A | D | F | L | V | T | E | V | E | N | G | . |
. |
. |
. |
. |
. |
. |
G | S | L | G | S | K | K | G | V | N | L | P |
Template Known Secondary structure |   |
| B | B | T | T |  |  |  | B | S |
| S | G | . | G | G | G | T |
|
| T | T |
|  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . |  |  |  |
| S | S |
|  |  |  |
| S |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |
|
|  |  | . |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
151 | . | . | . | . | . | . | . | . | 160 | . | . | . | |
. | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 210 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|