Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFU8
Confidence100.00%DateThu Jan 5 11:27:19 GMT 2012
Rank1Aligned Residues201
% Identity100%Templatec1i8dB_
PDB info PDB header:transferaseChain: B: PDB Molecule:riboflavin synthase; PDBTitle: crystal structure of riboflavin synthase
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGD
Query Conservation 






  
 
  
          
         
 













       
  

  


  
 
  
  
 
Alig confidence 















































































Template Conservation 






  
 
  
        
 
            












       
  

  


  
 
  
  
 
Template Sequence  MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGD
Template Known Secondary structure 
B
S



SS

GGG
TT

TT
TTTTSGGGG

TT
Template Predicted Secondary structure 
































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 

















Query SS confidence 















































































Query Sequence  WVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVH
Query Conservation   






  






 
 



  
 
                
   
  


 












  
    
 
 
Alig confidence 


































.....







































Template Conservation   






  






 
 



    
  
   .....             

 












  
    
 
 
Template Sequence  WVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILRQ. . . . . IWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVH
Template Known Secondary structure 


TTS
S
S

B
S




.....SSGGGGGG

TTSTT
SS
Template Predicted Secondary structure 







.....







Template SS confidence 















































































   81........90.........100.........110..... ....120.........130.........140.........150.....
 
   161........170.........180.........190.........200......
Predicted Secondary structure 
















Query SS confidence 













































Query Sequence  LIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAM
Query Conservation 




   
 
     

 



 
 
 
 
    
  
       
Alig confidence 













































Template Conservation 


 
   
 
   
 

 



 
 
 


    
  
     

Template Sequence  LIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAM
Template Known Secondary structure 

TTSSGGG

TT

T
Template Predicted Secondary structure 














Template SS confidence 













































   161........170.........180.........190.........200......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions