Job Description P77444 Confidence 99.92% Date Thu Jan 5 12:29:21 GMT 2012 Rank 187 Aligned Residues 301 % Identity 15% Template d2hoxa1 SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.40

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.									.	.	.	.	120
Predicted Secondary structure																																			.	.																																	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.																																	.	.	.	.	.	.	.	.
Query Sequence		Y	A	A	V	H	R	G	I	H	T	L	S	A	Q	A	T	E	K	M	E	N	V	R	K	R	A	S	L	F	I	N	A	R	.	.	S	A	E	E	L	V	F	V	R	G	T	T	E	G	I	N	L	V	A	N	S	W	G	N	S	N	V	R	A	G	D	N	.	.	.	.	.	.	.	.	I	I	I	S	Q
Query Conservation																																			.	.																																	.	.	.	.	.	.	.	.
Alig confidence																																			.	.																							.	.	.	.							.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.
Template Sequence		W	H	R	M	S	Y	F	F	N	P	V	S	N	F	I	S	F	E	L	E	K	T	I	K	E	L	H	E	V	V	G	N	A	A	A	K	D	R	Y	I	V	F	G	V	G	V	T	Q	L	I	H	G	L	V	I	S	L	.	.	.	.	S	P	N	M	T	A	T	P	D	A	P	E	S	K	V	V	A	H	A
Template Known Secondary structure		T	T	T		S	S	S		S	S			T	T																	T		B			T	T							S														.	.	.	.	S			T	T	T		T	T	S									S
Template Predicted Secondary structure																																																											.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.					.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	H	H	A	N	I	V	P	W	Q	M	L	C	A	R	V	G	A	E	L	R	V	I	P	L	N	P	D	G	T	L	Q	L	E	T	L	P	T	L	F	D	E	K	T	R	L	L	A	I	T	H	V	S	N	V	L	G	T	E	N	P	L	A	E	M	I	T	L	A	H	Q	H	G	A	K	V	L	V	D
Query Conservation
Alig confidence															.	.	.	.									.	.	.	.	.	.																																.	.	.	.	.	.	.
Template Conservation															.	.	.	.									.	.	.	.	.	.																																.	.	.	.	.	.	.
Template Sequence		P	F	Y	P	V	F	R	E	Q	T	K	Y	F	.	.	.	.	D	K	K	G	Y	V	W	A	.	.	.	.	.	.	G	N	A	A	N	Y	V	N	V	S	N	P	E	Q	Y	I	E	M	V	T	S	P	N	N	P	E	G	L	L	R	H	.	.	.	.	.	.	.	A	V	I	K	G	C	K	S	I	Y	D
Template Known Secondary structure		S												S	.	.	.	.			T	T					.	.	.	.	.	.			G	G	G	G	T	T		S		G	G	G							S	S		T	T	T						.	.	.	.	.	.	.		S	S	T	T
Template Predicted Secondary structure															.	.	.	.									.	.	.	.	.	.																																.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.					.	.	.	.	180	.	.	.							.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.								.	.	.	.	.	220	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.			.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.								.
Query SS confidence																																		.	.								.
Query Sequence		G	A	Q	A	V	M	H	H	P	V	D	V	Q	A	L	D	C	D	F	Y	V	F	S	G	H	K	L	Y	G	P	T	G	.	.	I	G	I	L	Y	V	K	.	E	A	L	L	Q	E	M	P	P	W	E	G	G	G	S	M	I	A	T	V	S	L	S	E	G	T	T	W	T	K	A	P	W	R	F	E	A	G
Query Conservation																																		.	.								.
Alig confidence																																		.	.								.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	V	Y	Y	W	P	H	Y	T	P	I	K	Y	K	A	D	E	D	I	L	L	F	T	M	S	K	F	T	G	H	S	G	S	R	F	G	W	A	L	I	K	D	E	S	V	Y	N	N	L	L	N	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	T	K	N	T	E
Template Known Secondary structure			T	T		S	T	T	T	S				S		B			S										T	S		G	G	G																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	S
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.																							.	.	280	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.											.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.														.	330	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	P	N	T	G	G	I	I	G	L	G	A	A	L	E	Y	V	S	A	L	.	.	.	.	.	.	.	.	.	.	G	L	N	N	I	A	E	Y	E	Q	N	L	M	H	Y	A	L	S	Q	L	E	S	V	P	D	L	T	L	Y	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	N	R	L	G	V
Query Conservation																						.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	T	P	R	E	T	Q	L	R	S	L	K	V	L	K	E	V	V	A	M	V	K	T	Q	K	G	T	M	R	D	L	N	T	F	G	F	K	K	L	R	E	R	W	V	N	I	T	A	L	L	D	Q	S	D	R	F	S	Y	Q	E	L	P	Q	S	E	Y	C	N	Y	F	R	R	M	R	P	P	S	P	S	Y
Template Known Secondary structure		S																								T	T	S	T	T	S																					T	T	S	S	S								S					T	T	T	T								S
Template Predicted Secondary structure
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	F	N	L	G	K	H	H	A	Y	D	V	G	S	F	L	D	N	Y	G	I	A	V	R	T	G	H	H	C	A	M	P	L	M	A	Y	Y	N	V	P	A	M	C	R	A	S	L	A	M	Y	N	T	H	E	E	V	D	R	L	V	T	G	L	Q	R	I	H	R
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.												.	.
Template Conservation																																		.	.	.	.	.	.	.												.	.
Template Sequence		A	W	V	K	C	E	W	E	E	D	K	D	C	Y	Q	T	F	Q	N	G	R	I	N	T	Q	N	G	V	G	F	E	A	.	.	.	.	.	.	.	S	S	R	Y	V	R	L	S	L	I	K	.	.	T	Q	D	D	F	D	Q	L	M	Y	Y	L	K	D	M	V	K
Template Known Secondary structure								S	G	G	G		S								T	T						G	G	G	G	T	S	.	.	.	.	.	.	.		T	T							S	S	.	.																	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.												.	.
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.								.	.	.	.	400	.	.	.	.	.	.			.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions