Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABM5
Confidence4.06%DateThu Jan 5 11:15:50 GMT 2012
Rank24Aligned Residues17
% Identity18%Templatec2xseA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:thymine dioxygenase jbp1; PDBTitle: the structural basis for recognition of j-base containing2 dna by a novel dna-binding domain in jbp1
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4950.........60.....
Predicted Secondary structure 
Query SS confidence 
















Query Sequence  GVAQQRAREARLRAAQQ
Query Conservation   
     

 
   
  
Alig confidence 
















Template Conservation 
  


 

  

 


Template Sequence  EKKRRXERKQRIEEARR
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 
















   541........550.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions