|   |
105 | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | I | I | D | W | V | R | D | T | I | N | A | P | A | E | E | L | G | P | S | Q | L | A | Q | R | A | V | D | L | I | S | N | V | A | G | D | R | V | T | Y | R | I | T | K | G | E | D | L | R | E | Q | G | Y | M | G | L | H | T | V | G | R | G | S | E | R | S | P | V | L | L | A | L | D | Y | N | P | T | G | D | K |
Query Conservation |   |
  |   |
|   |   |
|
|
|
|   |
|   |
|
|
|   |
|   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |
|   |   |   |
|
|
|   |
|
|
|
|
|   |
|
|   |   |
|
|   |
|
|   |
|   |
|   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |
|
|   |
|
|
|   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   | . | . | . |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |
|   |
|   |   |
Template Sequence |   |
R | L | L | N | T | F | L | E | L | V | Q | I | D | S | E | T | G | N | E | S | T | I | Q | P | I | L | K | E | K | F | I | A | L | . |
. |
. |
G | L | D | V | K | E | D | E | A | A | K | H | P | K | L | G | A | N | N | L | V | C | T | X | N | S | T | I | E | V | P | K | L | Y | L | T | S | H | X | D | T | V | V | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | S |
|
| B | T | T |
| T | T | T |  |  |  |  |  |  |  |  |  |  |  | T | . | . | . | T |
|  |  |  |  |
| S | G | G | G | S | T | T |
| S | S |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
| B |
| S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | |
|
|
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
  |
  |   |
185 | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | |
. | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | A | P | V | Y | A | C | L | V | G | K | G | I | T | F | D | S | G | G | Y | S | I | K | Q | T | A | F | M | D | S | M | K | S | D | M | G | G | A | A | T | V | T | G | A | L | A | F | A | I | T | R | G | L | N | . |
K | R | V | K | L | F | L | C | C | A | D | N | L | I | S |
Query Conservation |   |
  |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|   |   |   |
|   |   |
|
|   |
|
|   |
|
|
|
|
|
|
|
|   |   |
|   |
|   |
|   |
|   | . |
|
|
|   |   |
|
|   |
|   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |   | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|   |
Template Sequence |   |
A | I | N | V | K | P | I | V | K | D | D | G | Y | I | Y | S | D | G | T | T | I | L | G | . |
. |
. |
. |
. |
. |
. |
. |
A | D | D | K | A | G | L | A | A | X | L | E | V | L | Q | V | I | K | E | Q | Q | I | P | H | G | Q | I | Q | F | V | I | T | V | G | E | E | S | G | L |
Template Known Secondary structure |   |
| S | S |
|
|
|  |  |
| T | T | S |  |  |  |
|
| S | S | S |
|
|
| . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|
|
|  |  |  |  |  |  | S |
| G | G | G | T | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . |
  |