Job Description P37095 Confidence 48.76% Date Thu Jan 5 11:54:47 GMT 2012 Rank 34 Aligned Residues 135 % Identity 17% Template c3pfeA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:succinyl-diaminopimelate desuccinylase; PDBTitle: crystal structure of a m20a metallo peptidase (dape, lpg0809) from2 legionella pneumophila subsp. pneumophila str. philadelphia 1 at 1.503 a resolution Resolution 1.50 Å

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		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.						.	120	.	.	.	.	.						.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																				.	.	.	.	.								.	.	.	.	.
Query SS confidence																				.	.	.	.	.								.	.	.	.	.
Query Sequence		D	N	R	L	M	I	I	D	W	V	R	D	T	I	N	A	P	A	.	.	.	.	.	E	E	L	G	P	S	Q	.	.	.	.	.	L	A	Q	R	A	V	D	L	I	S	N	V	A	G	D	R	V	T	Y	R	I	T	K	G	E	D	L	R	E	Q	G	Y	M	G	L	H	T	V	G	R	G	S	E	R	S
Query Conservation																				.	.	.	.	.								.	.	.	.	.
Alig confidence																				.	.	.	.	.								.	.	.	.	.																											.	.	.	.
Template Conservation																																																															.	.	.	.
Template Sequence		Q	W	Q	E	E	I	L	P	S	L	C	D	Y	I	K	I	P	N	K	S	P	H	F	D	A	K	W	E	E	H	G	Y	X	E	Q	A	V	N	H	I	A	N	W	C	K	S	H	A	P	K	G	X	T	L	E	I	V	R	L	K	N	.	.	.	.	R	T	P	L	L	F	X	E	I	P	G	Q	I	D	D
Template Known Secondary structure						T										T				B		G	G	G		T	T																					T			T	T									T	T	.	.	.	.	S											S
Template Predicted Secondary structure																																																															.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.					.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.																						.
Query SS confidence																																																	.	.	.																						.
Query Sequence		P	V	L	L	A	L	D	Y	N	P	T	G	D	K	E	A	P	V	Y	A	C	L	V	G	K	G	I	T	F	D	S	G	G	Y	S	I	K	Q	T	A	F	M	D	S	M	K	S	.	.	.	D	M	G	G	A	A	T	V	T	G	A	L	A	F	A	I	T	R	G	L	N	.	K	R	V	K	L	F	L	C
Query Conservation																																																	.	.	.																						.
Alig confidence											.	.	.	.	.	.	.	.	.	.																													.	.	.																						.
Template Conservation											.	.	.	.	.	.	.	.	.	.
Template Sequence		T	V	L	L	Y	G	H	L	D	.	.	.	.	.	.	.	.	.	.	K	Q	P	E	X	S	G	W	S	D	D	L	H	P	W	K	P	V	L	K	N	G	L	L	Y	G	R	G	G	A	D	D	G	Y	S	A	Y	A	S	L	T	A	I	R	A	L	E	Q	Q	G	L	P	Y	P	R	C	I	L	I	I	E
Template Known Secondary structure											.	.	.	.	.	.	.	.	.	.	B					S				T	T		B	T	T	B					T	T				S	T	T																					T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.											.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		247	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	C	E
Template Known Secondary structure		S		G
Template Predicted Secondary structure
Template SS confidence
		160	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions