 |
Job Description | P37095 | Confidence | 42.40% | Date | Thu Jan 5 11:54:47 GMT 2012 |
Rank | 42 | Aligned Residues | 30 |
% Identity | 20% | Template | c2joaA_ |
PDB info |
PDB header:protein binding | Chain: A: PDB Molecule:serine protease htra1; |
PDBTitle: htra1 bound to an optimized peptide: nmr assignment of pdz2 domain and ligand resonances
|
Resolution | UNK |
|
  |   |
242 | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | |
. | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . |
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | L | F | L | C | C | A | D | N | L | I | S | G | N | A | . |
F | K | L | G | D | I | I | T | Y | R | N | G | K | K | V |
Query Conservation |   |
  |   |
|
|   |
|   |
|
|   |
|   |
|   |
| . |   |
|
|
|
|
|
|   |   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |
|   |   |   |
|
|
|   |   |
|
|
|   |   |
|
|
|
|   |   |
|
|
|   |   |
|
Template Sequence |   |
A | Y | I | I | E | V | I | P | D | T | P | A | E | A | G | G | L | K | E | N | D | V | I | I | S | I | N | G | Q | S | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| S | S | S |  |  |  |  |  | T |
|
| T | T |
|  |  |
| B |
| S | S |
| B |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
412 | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|