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Job DescriptionP37095
Confidence100.00%DateThu Jan 5 11:54:47 GMT 2012
Rank5Aligned Residues383
% Identity34%Templatec1gytG_
PDB info PDB header:hydrolaseChain: G: PDB Molecule:cytosol aminopeptidase; PDBTitle: e. coli aminopeptidase a (pepa)
Resolution2.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.........50.........60..... ....70.........80.........90..
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Query Sequence  LNGADDLGLIQRAARKIDGLGIKHVQLSGEG. . . . . . . . . . . . . . . . WDADRCWAFWQGYKAPKGTRKVVWPDL. . . . . .
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Template Sequence  LDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPT
Template Known Secondary structure 

TTS

S
GGGS

TT

T



TT
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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   93......100.........110.........120.........130.........140.........150.........160......
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Query Sequence  . . . . . . DDAQRQELDNRLMIIDWVRDTINAPAEELGPSQLAQRAVDLISNVAGDRVTYRITKGEDLREQGYMGLHTVGRG
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Template Sequence  RRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSY. SKNVITRVIGEQQMKELGMHSYLAVGQG
Template Known Secondary structure  GGGS
TTTSST.TTT
T
T
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   164.....170.........180.........190.........200.........210.... .....220.........230.........240..
 
   167..170.........180.........190.........200.........210.........220.........230.........240......
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Query Sequence  SERSPVLLALDYNPTGDKEAPVYACLVGKGITFDSGGYSIKQTAFMDSMKSDMGGAATVTGALAFAITRGLNKRVKLFLC
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Template Sequence  SQNESLMSVIEYKGNASEDAR. PIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLA
Template Known Secondary structure  SSS





TT

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TTS


STTGGGGGGGGT
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   243......250.........260... ......270.........280.........290.........300.........310.........320.
 
   247..250.........260.........270.........280.........290.........300.........310.........320......
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Query Sequence  CADNLISGNAFKLGDIITYRNGKKVEVMNTDAEGRLVLADGLIDASAQKPEMIIDAATLTGAAKTALGNDYHALFSFDDA
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Template Sequence  GCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNP
Template Known Secondary structure 

STT


TT

TTS

S
TT

GGGG

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   322.......330.........340.........350.........360.........370.........380.........390.........400.
 
   327..330.........340.........350.........360.........370.........380.........390.........400......
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Query Sequence  LAGRLLASAAQENEPFWRLPLAEFHRSQLPSNFAELNNTGSAAYPAGASTAAGFLSHFVENYQQGWLHIDCSATYRKAPV
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Template Sequence  LAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANI. . GGRPGGAITAGCFLSRFTR. . KYNWAHLDIAGTAWRSGK
Template Known Secondary structure  T





GGG

SSSSS
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STTTT
T..TS
TTTS
ST
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   402.......410.........420.........430.........440 .........450......... 460.........470.......
 
   407..410.........420......
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Query Sequence  EQWSAGATGLGVRTIANLLT
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Template Sequence  . . . AKGATGRPVALLAQFLL
Template Known Secondary structure  ...T


TT
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   478.480.........490....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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