 |
Job Description | P0ACR9 | Confidence | 96.69% | Date | Thu Jan 5 11:18:50 GMT 2012 |
Rank | 148 | Aligned Residues | 58 |
% Identity | 26% | Template | d1i1ga1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Lrp/AsnC-like transcriptional regulator N-terminal domain
|
Resolution | 2.90 |
|
  |   |
53 | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | N | E | T | L | F | M | A | L | I | T | L | E | S | Q | E | N | H | S | I | Q | P | S | E | L | S | C | A | L | G | S | S | R | T | N | A | T | R | I | A | D | E | L | E | K | R | G | W | I | E | R | R | E | S | D | N | D | R | R | C |
Query Conservation |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |
|   |   |
|   |   |   |
|
|   |   |
|   |   |
|
|   |   |
|
|
|   |
|   |   |   |   |   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |
|
|   |   |
|   | . | . |   |   |   |
|   |
|   |   |
|
|
|   |   |
|
|
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |
|
|   |   |   |
Template Sequence |   |
I | D | E | R | D | K | I | I | L | E | I | L | E | . |
. |
K | D | A | R | T | P | F | T | E | I | A | K | K | L | G | I | S | E | T | A | V | R | K | R | V | K | A | L | E | E | K | G | I | I | E | G | Y | T | I | K | I | N | P | K | K |
Template Known Secondary structure |   |
|
| S |  |  |  |  |  |  |  |  |  |  | . | . |  |
| T | T |
|
|  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | S |
|
|
|
|
|
|
|
| S | G | G |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  | . | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | |
|
. | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|