Job Description P0ACR9 Confidence 84.30% Date Thu Jan 5 11:18:50 GMT 2012 Rank 303 Aligned Residues 76 % Identity 17% Template d1bjaa_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Transcription factor MotA, activation domain Resolution 2.19

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		I	N	E	T	L	F	M	A	L	I	T	L	E	S	Q	E	N	H	S	I	Q	P	S	E	L	S	C	A	L	G	S	S	R	T	N	A	T	.	R	I	A	D	E	L	E	K	R	G	W	I	E	R	R	E	S	D	N	D	R	R	C	L	H	L	Q	L	T	E	K	G	H	E	F	L	R	E	V	L	P	P
Query Conservation																																							.
Alig confidence																		.	.																				.																			.	.	.	.	.	.	.
Template Conservation																		.	.																																							.	.	.	.	.	.	.
Template Sequence		L	N	E	K	T	A	T	I	L	I	T	I	A	K	K	D	.	.	F	I	T	A	A	E	V	R	E	V	H	P	D	L	G	N	A	V	V	N	S	N	I	G	V	L	I	K	K	G	L	V	E	K	S	G	D	G	.	.	.	.	.	.	.	L	I	I	T	G	E	A	Q	D	I	I	S	N	A	A	T	L
Template Known Secondary structure		S														S	T	.	.	T	B								T		T	T	S														T	T	T	S					T	T		.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.																																							.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.								.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		132	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	N	C	L	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	A	Q	E	N	A
Template Known Secondary structure						T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions