Job Description P0ACR9 Confidence 77.05% Date Thu Jan 5 11:18:50 GMT 2012 Rank 351 Aligned Residues 61 % Identity 13% Template c3t72o_ PDB info PDB header:transcription/dna Chain: O: PDB Molecule:pho box dna (strand 1); PDBTitle: phob(e)-sigma70(4)-(rnap-betha-flap-tip-helix)-dna transcription2 activation sub-complex Resolution 4.33 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		M	Q	S	K	L	L	E	N	R	N	K	M	L	K	A	Q	G	I	N	E	T	L	F	M	A	L	I	T	L	E	S	Q	E	.	N	H	S	I	Q	P	S	E	L	S	C	A	L	G	S	S	R	T	N	A	T	R	I	A	D	E	L	E	K	R
Query Conservation																																			.
Alig confidence																	.	.																	.
Template Conservation																	.	.
Template Sequence		T	T	E	S	L	R	A	A	T	H	D	V	L	A	G	.	.	L	T	A	R	E	A	K	V	L	R	M	R	F	G	I	D	M	N	T	D	Y	T	L	E	E	V	G	K	Q	F	D	V	T	R	E	R	I	R	Q	I	E	A	K	A	L	R	K
Template Known Secondary structure																	.	.	S								T	T	T	T	T	S	S	S	S		S												S	S
Template Predicted Secondary structure																	.	.
Template SS confidence
		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550			.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions