 |
Job Description | P0ACR9 | Confidence | 97.26% | Date | Thu Jan 5 11:18:50 GMT 2012 |
Rank | 114 | Aligned Residues | 72 |
% Identity | 24% | Template | c3df8A_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:possible hxlr family transcriptional factor; |
PDBTitle: the crystal structure of a possible hxlr family transcriptional factor2 from thermoplasma volcanium gss1
|
Resolution | 1.65 Å |
|
 |
  |   |
58 | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | |
. | . | . | . | . | . | . | . | 80 | . | |
. | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
| . |
|
|  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | M | A | L | I | T | L | E | S | Q | E | N | H | S | . |
I | Q | P | S | E | L | S | C | A | L | . |
G | S | S | R | T | N | A | T | R | I | A | D | E | L | E | K | R | G | W | I | E | R | R | E | S | D | N | D | R | R | C | L | H | L | Q | L | T | E | K | G | H | E | F | L | R | E | V | L | P | P | Q | H |
Query Conservation |   |
  |   |
|
|   |   |
|   |   |   |   |   |   |   | . |   |
|   |   |
|
|
|   |   |
| . |   |   |
|   |   |   |
|
|   |   |
|   |   |
|
|   |   |
|
|
|   |
|   |   |   |   |   |
|
|
|   |   |   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
|   |   |
|   |   |
|   |   |
|   |   |
|   |
|
|   |   |   |
|   |
|
|
|   |
|   |
|
|   |   |
|
|
|
|
|   |   |
|
|
|   |
|   |   |   |   | . | . | . | . |   |   |   |
|   |
|
|   |   |
|   |   |
|   |   |
|
|   |   |
|   |   |
Template Sequence |   |
Y | T | X | L | I | I | S | V | L | G | N | G | S | T | R | Q | N | F | N | D | I | R | S | S | I | P | G | I | S | S | T | I | L | S | R | R | I | K | D | L | I | D | S | G | L | V | E | R | R | S | G | Q | . |
. |
. |
. |
I | T | T | Y | A | L | T | E | K | G | X | N | V | R | N | S | L | X | P | L | L | Q |
Template Known Secondary structure |   |
T |  |  |  |  |  |  |  |  | T | S | S | S | S |
| B |
|  |  |  |  |  |  | T | S | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  | S | S | . | . | . | . | S |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
| . | . | . | . |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | |
|
|
|
. | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|