Job Description P0ACR9 Confidence 52.85% Date Thu Jan 5 11:18:50 GMT 2012 Rank 460 Aligned Residues 88 % Identity 8% Template c2w7nA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:trfb transcriptional repressor protein; PDBTitle: crystal structure of kora bound to operator dna: insight2 into repressor cooperation in rp4 gene regulation Resolution 1.85 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	N	R	N	K	M	L	K	A	Q	G	I	N	E	T	L	F	M	A	L	I	T	L	E	S	Q	E	N	H	S	I	Q	P	S	E	L	S	C	A	L	G	S	S	R	T	N	A	T	R	I	A	D	E	L	E	K	R	G	W	I	E	R	R	E	S	D	N	D	R	R	C	L	H	L	Q	L	T	E	K
Query Conservation
Alig confidence																													.	.	.																												.			.
Template Conservation																													.	.	.																												.			.
Template Sequence		E	S	Q	F	Q	E	A	I	Q	G	L	E	V	G	Q	Q	T	I	E	I	A	R	G	V	L	V	D	.	.	.	G	K	P	Q	A	T	F	A	T	S	L	G	L	T	R	G	A	V	S	Q	A	V	H	R	V	W	A	.	A	F	.	E	D	K	N	L	P	E	G	Y	A	R	V	T	A	V	L	P	E	H
Template Known Secondary structure										T	T																T	T	.	.	.												T																.			.			T				T	T
Template Predicted Secondary structure																													.	.	.																												.			.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		121	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	E	F	L	R	E	V	L	P	P	Q	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	A	Y	I	V	R	K	W	E	A	D	A	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions