Job Description P0ACR9 Confidence 84.27% Date Thu Jan 5 11:18:50 GMT 2012 Rank 304 Aligned Residues 100 % Identity 20% Template c2o59B_ PDB info PDB header:isomerase/dna Chain: B: PDB Molecule:dna topoisomerase 3; PDBTitle: structure of e. coli topoisomerase iii in complex with an 8-2 base single stranded oligonucleotide. frozen in glycerol3 ph 8.0 Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.																						.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	E	N	H	S	I	Q	P	S	E	L	S	C	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	S	R	T	N	A	T	R	I	A	D	E	L	E	K	R	G	W	I	E	R	R	E	S	D	N	D	R	R	C	L	H	L	Q	L	T	E	K	G	H	E	F	L
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.
Template Sequence		Q	P	P	R	H	F	T	D	A	T	L	L	S	A	M	T	G	I	A	R	F	V	Q	D	K	D	L	K	K	I	L	R	A	T	D	G	L	G	T	E	A	T	R	A	G	I	I	E	L	L	F	K	R	G	F	L	T	K	.	.	.	.	.	.	.	K	G	R	Y	I	H	S	T	D	A	G	K	A	L	F
Template Known Secondary structure																		T	G	G	G	G													T	T	S	S	S		T	T	T											T	T	S				.	.	.	.	.	.	.	S	S	S
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.
Template SS confidence
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.								.	.	.	.	.	.	550	.	.	.	.	.	.	.	.
		126										.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.
Query Sequence		R	.	.	.	.	.	.	.	.	.	E	V	L	P	P	Q	H	N	C	L	H	Q	L	W	S	A	L	S	T	T	E	K	D	Q	L	E	Q	I	T	R	K	L	L	S	R	L	D	Q	M	E	Q	D	G	V	V	L	E	A
Query Conservation			.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.																	.
Template Conservation																												.
Template Sequence		H	S	L	P	E	M	A	T	R	P	D	M	T	A	H	W	E	S	V	L	T	Q	I	S	E	K	.	Q	C	R	Y	Q	D	F	M	Q	P	L	V	G	T	L	Y	Q	L	I	D	Q	A	K	R	T	P	V	R	Q	F	R
Template Known Secondary structure				S						S	S															T	T	.	S	S																						T			G	G	G	G	T
Template Predicted Secondary structure																												.
Template SS confidence
		559	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.		.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions