Job Description P0ACR9 Confidence 99.85% Date Thu Jan 5 11:18:50 GMT 2012 Rank 27 Aligned Residues 137 % Identity 18% Template c2nyxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:probable transcriptional regulatory protein, rv1404; PDBTitle: crystal structure of rv1404 from mycobacterium tuberculosis Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		L	L	T	R	L	C	M	H	M	Q	S	K	L	L	E	N	R	N	K	M	L	K	A	Q	.	.	G	I	N	E	T	L	F	M	A	L	I	T	L	E	S	Q	E	N	H	S	I	Q	P	S	E	L	S	C	A	L	G	S	S	R	T	N	A	T	R	I	A	D	E	L	E	K	R	G	W	I	E	R	R	E
Query Conservation																										.	.
Alig confidence																										.	.																		.	.
Template Conservation																																													.	.
Template Sequence		V	I	T	D	A	L	L	T	A	S	R	L	L	V	A	I	S	A	H	S	I	A	Q	V	D	E	N	I	T	I	P	Q	F	R	T	L	V	I	L	S	N	H	G	.	.	P	I	N	L	A	T	L	A	T	L	L	G	V	Q	P	S	A	T	G	R	X	V	D	R	L	V	G	A	E	L	I	D	R	L	P
Template Known Secondary structure											T																T	T																	.	.	S											T	S															T	T	S
Template Predicted Secondary structure																																													.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	N	D	R	R	C	L	H	L	Q	L	T	E	K	G	H	E	F	L	R	E	V	L	P	P	Q	H	N	C	L	H	Q	L	W	S	A	L	S	T	T	E	K	D	Q	L	E	Q	I	T	R	K	L	L	S	R	L	D	Q	M	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	P	T	S	R	R	E	L	L	A	A	L	T	K	R	G	R	D	V	V	R	Q	V	T	E	H	R	R	T	E	I	A	R	I	V	E	Q	X	A	P	A	E	R	H	G	L	V	R	A	L	T	A	F	T	E	A	G	G	E	P	D
Template Known Secondary structure			S	S	S		S																														T	T	S		G	G	G		S	S													T
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions