Job Description P0ACR9 Confidence 99.11% Date Thu Jan 5 11:18:50 GMT 2012 Rank 58 Aligned Residues 112 % Identity 22% Template c2it0A_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:iron-dependent repressor ider; PDBTitle: crystal structure of a two-domain ider-dna complex crystal2 form ii Resolution 2.60 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		G	I	N	E	T	L	F	M	A	L	I	T	L	E	S	.	.	Q	E	N	H	S	I	Q	P	S	E	L	S	C	A	L	G	S	S	R	T	N	A	T	R	I	A	D	E	L	E	K	R	G	W	I	E	R	R	E	S	D	N	D	R	R	C	L	H	L	Q	L	T	E	K	G	H	E	F	L	R	E	V	L
Query Conservation																	.	.
Alig confidence																	.	.																																						.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.
Template Sequence		E	L	V	D	T	T	E	M	Y	L	R	T	I	Y	D	L	E	E	E	G	V	T	P	L	R	A	R	I	A	E	R	L	D	Q	S	G	P	T	V	S	Q	T	V	S	R	M	E	R	D	G	L	L	R	V	.	.	.	.	.	.	A	G	D	R	H	L	E	L	T	E	K	G	R	A	L	A	I	A	V	M
Template Known Secondary structure				S	S															T	T												T	T																T	T	S				.	.	.	.	.	.		T	T
Template Predicted Secondary structure																																																								.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.							.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.										.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.												.	.	.	.	.	.	.	.	.
Query SS confidence														.	.												.	.	.	.	.	.	.	.	.
Query Sequence		P	P	Q	H	N	C	L	H	Q	L	W	S	.	.	A	L	S	T	T	E	K	D	Q	L	E	.	.	.	.	.	.	.	.	.	Q	I	T	R	K	L	L	S	R	L	D	Q	M	E	Q	D	G
Query Conservation														.	.												.	.	.	.	.	.	.	.	.
Alig confidence														.	.												.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	K	H	R	L	A	E	R	L	L	V	D	V	I	G	L	P	W	E	E	V	H	A	E	A	C	R	W	E	H	V	M	S	E	D	V	E	R	R	L	V	K	V	L	N	N	P	T	T	S	P
Template Known Secondary structure														T	T															T	T	T													T	T	S			B		T
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions