Job Description P0ACR9 Confidence 73.57% Date Thu Jan 5 11:18:50 GMT 2012 Rank 381 Aligned Residues 77 % Identity 14% Template c2gajA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:dna topoisomerase i; PDBTitle: structure of full length topoisomerase i from thermotoga maritima in2 monoclinic crystal form Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.					.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		E	N	H	S	I	Q	P	S	E	L	S	C	A	L	G	.	.	.	.	S	S	R	T	N	A	T	R	I	A	D	E	L	E	K	R	G	W	I	E	R	R	E	S	D	N	D	R	R	C	L	H	L	Q	L	T	E	K	G	H	E	F	L	R	E	V	L	P	P	Q	H	N	C	L	H	Q	L	W	S	A	L
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.																										.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Template Sequence		P	K	P	R	Y	T	E	G	S	L	V	K	E	M	E	R	L	G	I	G	R	P	S	T	Y	A	S	T	I	K	L	L	L	N	R	G	Y	I	K	K	I	R	G	Y	.	.	.	.	.	.	.	L	Y	P	T	I	V	G	S	V	V	M	D	Y	L	E	K	K	Y	S	D	V	.	.	.	.	.	.	.	V
Template Known Secondary structure																			T		S		T	T	T											T	T	S					T	T		.	.	.	.	.	.	.				B														S	T	T	T	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Template SS confidence
		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.								.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.								.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	T	E	K	D	Q	L	E	Q	I	T	R	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	S	F	T	A	E	M	E	K	D	L	D	E	V
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		507	.	.	510	.	.	.	.	.	.	.	.	.	520	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions