 |
Job Description | P77395 | Confidence | 98.32% | Date | Thu Jan 5 12:28:31 GMT 2012 |
Rank | 247 | Aligned Residues | 100 |
% Identity | 19% | Template | d2b5ea3 |
SCOP info | Thioredoxin fold
| Thioredoxin-like
| PDI-like
|
Resolution | 2.40 |
|
 |
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | |
. | . | . | . | 80 | . | . | . | . | |
|
Predicted Secondary structure |   |
 |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
| . |
|
|
|
|  |  |  |  |  | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
. |
Query Sequence |   |
N | I | N | E | S | N | L | Q | Q | V | L | E | Q | S | M | T | T | P | V | L | F | Y | F | W | S | E | R | S | Q | H | C | L | Q | L | T | P | I | L | E | S | L | A | A | Q | Y | N | G | Q | F | I | L | A | K | L | D | C | D | A | E | Q | M | I | A | A | Q | F | G | L | . |
R | A | I | P | T | V | Y | L | F | . |
. |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |
|   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
| . |   |   |   |
|   |   |   |   |   | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
|
|   |   |   |
|   |   |   |
|   |   |   | . | . |
|
|
|
|   |   |
|
|   |   |   | . |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|   |
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|
|   |
|   |   |
|
|   |   |   |
Template Sequence |   |
E | I | D | G | S | V | F | A | Q | Y | V | E | S | . |
. |
G | L | P | L | G | Y | L | F | Y | N | D | . |
E | E | E | L | E | E | Y | K | P | L | F | T | E | L | A | K | K | N | R | G | L | M | N | F | V | S | I | D | A | R | K | F | G | R | H | A | G | N | L | N | M | K | E | Q | F | P | L | F | A | I | H | D | M |
Template Known Secondary structure |   |
B |
|
|  |  |  |  |  |  |  |  |  | T | . | . | T | S |
|  |  |  |  |  |  | S | S | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T |
|  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  | T | T |
|
| S |
| S | S |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |  |
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
243 | . | . | . | . | . | . | 250 | . | . | . | . | . | |
|
. | . | . | . | 260 | . | . | . | . | . | . | |
. | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . |
  |
  |   |
85 | . | . | . | . | 90 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | N | G | Q | P | V | D | G | F | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | P | Q | P | E | E | A | I | R | A | L | L | D | K | V | L |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |
|
|   |
|   |   |
Template Sequence |   |
T | E | D | L | K | Y | G | L | P | Q | L | S | E | E | A | F | D | E | L | S | D | K | I | V | L | E | S | K | A | I | E | S | L | V | K | D | F | L |
Template Known Secondary structure |   |
T | T | T |  |  |  |  |
|
|
|
|
|  |  |  |  |  | T |
|
| S |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|