 |
Job Description | P77395 | Confidence | 96.75% | Date | Thu Jan 5 12:28:31 GMT 2012 |
Rank | 371 | Aligned Residues | 87 |
% Identity | 16% | Template | d1xvqa_ |
SCOP info | Thioredoxin fold
| Thioredoxin-like
| Glutathione peroxidase-like
|
Resolution | 1.75 |
|
 |
  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | |
. | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 70 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
Query Sequence |   |
M | T | T | P | V | L | F | Y | F | W | S | E | . |
R | S | Q | H | C | L | Q | L | T | P | I | L | E | S | L | A | A | Q | Y | N | G | Q | F | I | L | A | K | L | D | C | D | A | E | Q | M | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | A | A | Q | F | G | L | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
A |
Query Conservation |   |
  |   |   |   |
|   |
|   |
|   |
|   | . |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   | . | . | . | . | . | . | . | . | . |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
Template Conservation |   |
  |
|
|   |   |
|
|   |
|   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   | . |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | G | K | S | V | L | L | N | I | F | P | S | V | D | T | P | V | C | A | T | S | V | R | T | F | D | E | R | A | A | A | S | G | A | . |
T | V | L | V | S | K | D | L | P | F | A | Q | K | R | F | C | N | V | M | P | A | S | A | F | R | D | S | F | G | E | D | Y | G | V | T | I | A | D | G | P | M | A | G | L | L |
Template Known Secondary structure |   |
T | T | S |
|  |  |  |  |  |
| S |
|
|
| S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| . |  |  |
|
| B | S | S |
|  |  |  |  | T | T |
|
|
| B |
|
|
| B |
| T | T | S | S |  |  |  |  | T | T |
| B | B |
| S | S | T | T | T | T | S | B |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | |
. | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
  |
  |   |
78 | . | 80 | . | . | . | . | |
. | . | . | . | . | 90 | . | . | . | |
|
. | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  | . |  |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | P | T | V | Y | L | F | . |
Q | N | G | Q | P | V | D | G | F | . |
. |
Q | G | P | Q | P | E | E | A | I | R | A | L | L | D | K | V |
Query Conservation |   |
  |
|   |   |   |   |   | . |   |   |
|   |   |   |   |   |   | . | . |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|
Template Sequence |   |
A | R | A | I | V | V | I | G | A | D | G | N | V | A | Y | T | E | L | V | P | E | I | A | Q | E | P | N | Y | E | A | A | L | A | A | L |
Template Known Secondary structure |   |
| S |  |  |  |  |  |
| T | T | S | B |  |  |  |  |  |  |
| S | B | T | T |
|
|
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
129 | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|