Phyre 2 alignment of P77395 with d1t1va

Job Description P77395
Confidence 87.81% Date Thu Jan 5 12:28:31 GMT 2012

Rank 398 Aligned Residues 62

% Identity 13% Template d1t1va_

SCOP info Thioredoxin fold Thioredoxin-like SH3BGR (SH3-binding, glutamic acid-rich protein-like)

Resolution 1.60

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	27	.	.	30	.	.	.	.	.							.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.					.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.																																											.	.	.	.
Query SS confidence										.	.	.	.	.	.																																											.	.	.	.
Query Sequence	L	F	Y	F	W	S	E	R	S	.	.	.	.	.	.	Q	H	C	L	Q	L	T	P	I	L	E	S	L	A	A	Q	Y	N	G	Q	F	I	L	A	K	L	D	C	D	A	E	Q	M	I	A	A	Q	F	G	L	R	A	.	.	.	.	I	P	T	V	Y	L	F	Q	N	G	Q	P	V	D	G	F	Q
Query Conservation										.	.	.	.	.	.																																											.	.	.	.
Alig confidence										.	.	.	.	.	.											.	.	.	.					.	.																							.	.	.	.
Template Conservation																										.	.	.	.					.	.
Template Sequence	L	R	V	Y	S	T	S	V	T	G	S	R	E	I	K	S	Q	Q	S	E	V	T	R	I	L	.	.	.	.	D	G	K	R	.	.	I	Q	Y	Q	L	V	D	I	S	Q	D	N	A	L	R	D	E	M	R	T	L	A	G	N	P	K	A	T	P	P	Q	I	V	N	G	N	H	Y	C	G	D	Y	E
Template Known Secondary structure							S	S		S																.	.	.	.			T	T	.	.								T	T	S												T	T		T	T			S						T	T
Template Predicted Secondary structure																										.	.	.	.					.	.
Template SS confidence
	4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.					.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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