Job Description P77395 Confidence 86.64% Date Thu Jan 5 12:28:31 GMT 2012 Rank 401 Aligned Residues 134 % Identity 13% Template c3txmA_ PDB info PDB header:hydrolase, protein binding Chain: A: PDB Molecule:26s proteasome regulatory complex subunit p42b; PDBTitle: crystal structure of rpn6 from drosophila melanogaster, gd(3+) complex Resolution 3.00 Å

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		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.							.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.							.
Predicted Secondary structure																										.	.	.	.	.	.																																												.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.																																												.	.	.	.	.	.
Query Sequence		E	I	G	L	L	L	A	E	T	L	I	A	L	N	R	S	E	D	A	E	A	V	L	K	.	.	.	.	.	.	T	I	P	L	Q	D	Q	D	T	R	Y	Q	G	L	V	A	Q	I	E	L	L	K	Q	A	A	D	T	P	E	I	Q	Q	L	Q	Q	Q	V	A	E	N	P	E	D	.	.	.	.	.	.	A
Query Conservation																										.	.	.	.	.	.																																												.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.																																												.	.	.	.	.	.
Template Conservation
Template Sequence		Q	G	I	L	Q	Q	G	E	L	Y	K	Q	E	G	K	A	K	E	L	A	D	L	I	K	V	T	R	P	F	L	S	S	I	S	K	A	K	A	A	K	L	V	R	S	L	V	D	M	F	L	D	M	D	A	G	T	G	I	E	V	Q	L	C	K	D	C	I	E	W	A	K	Q	E	K	R	T	F	L	R	Q
Template Known Secondary structure														T	T																	T	T	S																		T	S																				T	T	T
Template Predicted Secondary structure
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.					.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																																								.	.	.	.
Query SS confidence																																								.	.	.	.
Query Sequence		A	L	A	T	Q	L	A	L	Q	L	H	Q	V	G	R	N	E	E	A	L	E	L	L	F	G	H	L	R	K	D	L	T	A	A	D	G	Q	T	.	.	.	.	R	K	T	F	Q	E	I	L	A	A	L	G	T	G	D	A	L	A	S	K	Y	R	R	Q	L	Y	A	L
Query Conservation																																								.	.	.	.
Alig confidence																																								.	.	.	.
Template Conservation
Template Sequence		S	L	E	A	R	L	I	A	L	Y	F	D	T	A	L	Y	T	E	A	L	A	L	G	A	Q	L	L	R	E	L	K	K	L	D	D	K	N	L	L	V	E	V	Q	L	L	E	S	K	T	Y	H	A	L	S	N	L	P	K	A	R	A	A	L	T	S	A	R	T	T	A
Template Known Secondary structure															T																		T	S	S		T																	T	T
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions