Job Description P77395 Confidence 82.46% Date Thu Jan 5 12:28:31 GMT 2012 Rank 407 Aligned Residues 100 % Identity 16% Template c3mkqB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:coatomer subunit alpha; PDBTitle: crystal structure of yeast alpha/betaprime-cop subcomplex of the copi2 vesicular coat Resolution 2.50 Å

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		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	Q	E	S	N	Y	T	D	A	L	P	L	L	K	D	A	W	Q	L	S	N	Q	N	G	E	I	G	L	L	L	A	E	T	L	I	A	L	N	R	S	E	D	A	E	A	V	L	K	T	I	P	L	Q	D	Q	D	T	R	Y	Q	G	L	V	A	Q	I	E	L	L	K	Q	A	A	D	T	P	E	I	Q
Query Conservation
Alig confidence																			.	.	.	.	.																														.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.																														.	.	.	.	.	.	.	.
Template Sequence		A	L	E	Y	G	N	L	D	A	A	L	D	E	A	K	K	L	.	.	.	.	.	N	D	S	I	T	W	E	R	L	I	Q	E	A	L	A	Q	G	N	A	S	L	A	E	M	I	Y	Q	T	Q	.	.	.	.	.	.	.	.	H	S	F	D	K	L	S	F	L	Y	L	V	T	G	D	V	N	K	L	S	K
Template Known Secondary structure					T	T													.	.	.	.	.																T	T												T	.	.	.	.	.	.	.	.	T													T
Template Predicted Secondary structure																			.	.	.	.	.																														.	.	.	.	.	.	.	.
Template SS confidence
		656	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.						.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.									.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	Q	Q	Q	V	A	E	N	P	E	D	A	A	L	A	T	Q	L	A	L	Q	L	H	Q	V	G	R	N	E	E	A	L	E	L	L	F	G
Query Conservation
Alig confidence												.	.	.	.	.
Template Conservation												.	.	.	.	.
Template Sequence		M	Q	N	I	A	Q	T	R	E	D	.	.	.	.	.	F	G	S	M	L	L	N	T	F	Y	N	N	S	T	K	E	R	S	S	I	F	A	E
Template Known Secondary structure									T	T		.	.	.	.	.												T
Template Predicted Secondary structure												.	.	.	.	.
Template SS confidence
		723	.	.	.	.	.	.	730	.	.						.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions