Return to main results Retrieve Phyre Job Id

Job DescriptionP77395
Confidence99.88%DateThu Jan 5 12:28:31 GMT 2012
Rank18Aligned Residues110
% Identity15%Templatec3ed3A_
PDB info PDB header:isomeraseChain: A: PDB Molecule:protein disulfide-isomerase mpd1; PDBTitle: crystal structure of the yeast dithiol/disulfide2 oxidoreductase mpd1p
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.... .....60.........70.........
Predicted Secondary structure 

















..











Query SS confidence 




















































. .
























Query Sequence  SVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNG. . QFILAKLDCDAEQMIAAQFGLRAIP
Query Conservation      
       
      
    
 
 
 
  
  
                ..      

            
   
Alig confidence 




















.






























..
























Template Conservation      
  

  

   
    .   

 


 

  
    
   
 
             

      
     
  

Template Sequence  SDPHISELTPKSFDKAIHNTN. YTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFP
Template Known Secondary structure  S
TT


TSSS.S

TT
TTTTSTTSTTTTT

SSS
Template Predicted Secondary structure 







.





















Template SS confidence 















































































   27..30.........40....... ..50.........60.........70.........80.........90.........100.....
 
   80.........90.. .......100.........110..
Predicted Secondary structure 






....





Query SS confidence 












. . . .



















Query Sequence  TVYLFQNGQPVDG. . . . FQGPQPEEAIRALLDKVLPR
Query Conservation         
     ....  
      
   
      
Alig confidence 












....



















Template Conservation 

  
  
           
      
          
Template Sequence  TLMVFRPPKISAHANEVYSGARTLAPIVDFSLSRIRS
Template Known Secondary structure 








S

STT


Template Predicted Secondary structure 



















Template SS confidence 




































   106...110.........120.........130.........140..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions