Job Description P77395 Confidence 91.52% Date Thu Jan 5 12:28:31 GMT 2012 Rank 391 Aligned Residues 149 % Identity 15% Template c3e4bD_ PDB info PDB header:protein binding Chain: D: PDB Molecule:algk; PDBTitle: crystal structure of algk from pseudomonas fluorescens wcs374r Resolution 2.50 Å

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		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.				.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																																							.	.	.
Query SS confidence																																							.	.	.
Query Sequence		S	N	Y	T	D	A	L	P	L	L	K	D	A	W	Q	L	S	N	Q	N	G	E	I	G	L	L	L	A	E	T	L	I	A	L	N	R	S	.	.	.	E	D	A	E	A	V	L	K	T	I	P	L	Q	D	Q	D	T	R	Y	Q	G	L	V	A	Q	I	E	L	L	K	Q	A	A	D	T	P	E	I	Q	Q
Query Conservation																																							.	.	.
Alig confidence																	.	.																					.	.	.															.
Template Conservation																	.	.																																						.
Template Sequence		T	P	D	E	K	T	A	Q	A	L	L	E	K	I	A	.	.	P	G	Y	P	A	S	W	V	S	L	A	Q	L	L	Y	D	F	P	E	L	G	D	V	E	Q	M	M	K	Y	L	D	N	G	R	A	A	D	.	Q	P	R	A	E	L	L	L	G	K	L	Y	Y	E	G	K	W	V	P	A	D	A	K	A	A
Template Known Secondary structure		S														T	.	.	T	T	S	T														T	T	S																T	T	.																S	S	S
Template Predicted Secondary structure																	.	.																																						.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.			.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.		.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.					.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.																	.
Predicted Secondary structure																										.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Q	Q	Q	V	A	E	N	P	E	D	A	A	L	A	T	Q	L	A	L	Q	L	H	Q	.	.	.	.	V	G	R	N	E	E	A	L	E	L	L	F	G	H	L	R	K	D	L	T	A	A	D	G	Q	T	R	K	T	F	Q	E	I	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A
Query Conservation																										.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.																	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.
Template Sequence		E	A	H	F	E	K	A	V	G	R	E	V	A	A	D	Y	Y	L	G	Q	I	Y	R	R	G	Y	L	G	K	V	Y	P	Q	K	A	L	D	H	L	L	T	A	A	R	.	.	.	.	N	G	Q	N	S	A	D	F	A	I	A	Q	L	F	S	Q	G	K	G	T	K	P	D	P	L	N	A	Y	V	F	S	Q
Template Known Secondary structure							T	T	T	T	T															T	T	T	S	S																.	.	.	.	T	T		T	T									T	T	S		T	T	S
Template Predicted Secondary structure																																														.	.	.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350					.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	T	G	D	A	L	A	S	K	Y	R	R	Q	L	Y	A	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	K	A	T	P	E	A	N	D	L	A	T	Q	L	E	A	P	L
Template Known Secondary structure			T	T														T	T	S
Template Predicted Secondary structure
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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