Job Description P77395 Confidence 99.41% Date Thu Jan 5 12:28:31 GMT 2012 Rank 122 Aligned Residues 168 % Identity 13% Template c2xpiA_ PDB info PDB header:cell cycle Chain: A: PDB Molecule:anaphase-promoting complex subunit cut9; PDBTitle: crystal structure of apc/c hetero-tetramer cut9-hcn1 Resolution 2.60 Å

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		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	E	E	E	L	K	A	Q	Q	A	M	Q	L	M	Q	E	S	N	Y	T	D	A	L	P	L	L	K	D	A	W	Q	L	S	N	Q	N	G	E	I	G	L	L	L	A	E	T	L	I	A	L	N	R	S	E	D	A	E	A	V	L	K	T	I	P	L	Q	D	Q	D	T	R	Y	Q	G	L	V	A	Q	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	Q	F	G	P	A	W	I	G	F	A	H	S	F	A	I	E	G	E	H	D	Q	A	I	S	A	Y	T	T	A	A	R	L	F	Q	G	T	H	L	P	Y	L	F	L	G	M	Q	H	M	Q	L	G	N	I	L	L	A	N	E	Y	L	Q	S	S	Y	A	L	F	Q	Y	D	P	L	L	L	N	E	L	G	V
Template Known Secondary structure		T	T																T															T	T	T	T		S														T
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.								.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.
Query Sequence		E	L	L	K	Q	A	A	D	T	P	E	I	Q	Q	L	Q	Q	Q	V	A	E	N	P	E	D	.	.	.	.	.	.	.	A	A	L	A	T	Q	L	A	L	Q	L	H	Q	V	G	R	N	E	E	A	L	E	L	L	F	G	H	L	R	K	D	L	T	A	A	D	G	Q	T	R	K	T	F	Q	E	I	L	A
Query Conservation																											.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.																																		.	.
Template Conservation																																																																			.	.
Template Sequence		V	A	F	N	K	S	D	M	Q	T	A	I	N	H	F	Q	N	A	L	L	L	V	K	K	T	Q	S	N	E	K	P	W	A	A	T	W	A	N	L	G	H	A	Y	R	K	L	K	M	Y	D	A	A	I	D	A	L	N	Q	G	L	L	L	S	T	N	.	.	D	A	N	V	H	T	A	I	A	L	V	Y	L
Template Known Secondary structure						T	T																			S				S	G	G	G														T	T																S	S		.	.
Template Predicted Secondary structure																																																																			.	.
Template SS confidence
		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.			.	550	.	.	.	.	.	.	.	.	.	560	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	G	T	G	D	A	L	A	S	K	Y	R	R	Q	L	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	K	K	I	P	G	L	A	I	T	H	L	H	E	S	L	A
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		562	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions